Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC023813.4-201ENST00000607580 580 ntBASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 AC125336.1-201ENST00000508893 2827 ntBASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 AC010329.2-201ENST00000595195 2737 ntBASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PCDHA4Q9UN74 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AL672167.1-204ENST00000641875 3017 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 Y_RNA.22-201ENST00000362492 102 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 RNA5SP191-201ENST00000362585 102 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 Y_RNA.128-201ENST00000363391 112 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 RNU5E-8P-201ENST00000363502 116 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 SNORA63C-201ENST00000364578 129 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 RNU6-39P-201ENST00000384344 107 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 RNU6-831P-201ENST00000384548 107 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 MIR550A3-201ENST00000390735 95 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 U3.35-201ENST00000408405 208 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 RNA5SP113-201ENST00000410486 84 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AL451054.2-201ENST00000420896 202 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 CKS1BP6-201ENST00000424932 240 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 LYPLA1P1-201ENST00000434514 622 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 UBE2V1P13-201ENST00000436983 439 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 Z80107.2-201ENST00000445127 392 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC012512.1-201ENST00000446594 718 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC104308.1-201ENST00000454621 333 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 RPS5P7-201ENST00000456664 608 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 RN7SL610P-201ENST00000463845 291 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 KLHL2P1-201ENST00000508691 521 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 OR4P1P-201ENST00000530808 1136 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC133555.2-201ENST00000550213 292 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 RPL21P12-201ENST00000559810 515 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC018552.1-201ENST00000562099 811 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 SULT1C2P2-201ENST00000562517 294 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC009852.2-201ENST00000567898 485 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC007151.1-201ENST00000572774 483 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC006504.6-201ENST00000590142 199 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 FAM27B-201ENST00000610601 213 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 AC004972.1-201ENST00000623934 2209 ntBASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHA4Q9UN74 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 AC073343.1-201ENST00000328239 651 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 Y_RNA.100-201ENST00000363141 102 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 RNU6-1243P-201ENST00000364028 107 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 Y_RNA.259-201ENST00000364619 101 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 SNORD42.2-201ENST00000365570 69 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 MIR454-201ENST00000390180 115 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 Y_RNA.579-201ENST00000390939 94 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 SSXP10-201ENST00000402595 565 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 RNU4-26P-201ENST00000410270 107 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 NPM1P40-201ENST00000412758 733 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 RPL26P29-201ENST00000415623 438 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 HSPE1P1-201ENST00000421494 318 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 GTF2IP13-201ENST00000438487 386 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 RPL30P11-201ENST00000495304 339 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 SCARNA22-201ENST00000503991 125 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 HMGB3P16-201ENST00000508037 287 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 AC004062.1-201ENST00000509926 645 ntBASIC5.5□□□□□ -1.53
PCDHA4Q9UN74 RNU6-1170P-201ENST00000515974 106 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms