Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC119674.1-207ENST00000641355 633 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC012078.1-201ENST00000405035 1646 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 Y_RNA.146-201ENST00000363549 102 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 SNORA5A-201ENST00000384111 134 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 Y_RNA.450-201ENST00000384198 113 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 SNORD96B-201ENST00000386148 79 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 SNORA40.3-201ENST00000390964 122 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 HMGB3P31-201ENST00000413333 595 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 NUP35P1-201ENST00000422734 947 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC093084.1-201ENST00000424233 687 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 MTCO1P3-201ENST00000429327 192 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AL365184.2-201ENST00000431139 435 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 RAD23BP3-201ENST00000454157 1152 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AL445433.1-201ENST00000457507 257 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 RPS20P4-201ENST00000461659 355 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC112206.1-201ENST00000468416 477 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC093677.1-201ENST00000514414 678 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC026801.2-201ENST00000515352 425 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 RN7SKP13-201ENST00000515933 244 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 MIR548AB-201ENST00000584917 84 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 LINC01109-201ENST00000603837 3081 ntBASIC3.19□□□□□ -1.9
NOTCH3Q9UM47 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 RNU5F-7P-201ENST00000363696 115 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 RNA5SP27-201ENST00000363839 119 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 HSPE1P12-201ENST00000412576 301 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AL450992.3-201ENST00000413192 568 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 RPL7P44-201ENST00000424827 742 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 BX890604.2-201ENST00000427883 474 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AL050341.1-201ENST00000447743 313 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AL591363.1-201ENST00000450091 483 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC092757.1-201ENST00000467293 467 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC108751.2-201ENST00000469993 231 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 SNRPCP3-201ENST00000474888 476 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AF213884.1-201ENST00000488102 463 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC104108.1-201ENST00000509930 412 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 YPEL5P3-201ENST00000547227 352 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC009852.2-201ENST00000567898 485 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 RPL23AP97-201ENST00000568955 471 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC015917.1-201ENST00000579654 510 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC010487.1-201ENST00000594408 1172 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC090574.1-201ENST00000623186 233 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 HSPA8P17-201ENST00000427029 1382 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 RNU6-501P-201ENST00000364072 100 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 RNU6-353P-201ENST00000364266 108 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 SNORA4.3-201ENST00000365564 137 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 RNU6-1103P-201ENST00000384150 107 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 RPS20P14-201ENST00000412545 360 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC093698.1-201ENST00000423843 571 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AL512649.1-201ENST00000428997 581 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 MTND4LP10-201ENST00000435146 291 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 TAAR7P-201ENST00000436141 242 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC234064.1-201ENST00000436312 247 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms