Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 FAM103A2P-201ENST00000444122 354 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 RPL7P36-201ENST00000444633 681 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 RPS7P7-201ENST00000463499 571 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC010285.1-201ENST00000470580 392 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC068724.1-201ENST00000487100 792 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 RN7SL604P-201ENST00000492589 296 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC146944.2-203ENST00000502493 354 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC139495.1-202ENST00000513164 354 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 RNA5SP315-201ENST00000516340 116 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 RNA5SP312-201ENST00000517068 116 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 SNORA31.20-201ENST00000517111 133 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 MIR2116-201ENST00000517221 80 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC025881.1-201ENST00000518851 512 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC063950.1-201ENST00000552036 308 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 OR4K8P-201ENST00000578842 1048 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 MIR4307-201ENST00000582802 84 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC008507.1-201ENST00000587506 734 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC020910.2-201ENST00000603635 610 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC011451.2-201ENST00000604303 598 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AL031666.3-201ENST00000609320 1006 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 ZYXP1-201ENST00000617638 118 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 Z69908.1-201ENST00000622603 247 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AC093591.3-201ENST00000634516 308 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 AL157700.1-201ENST00000561973 1432 ntBASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HCN3Q9P1Z3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AC116667.1-201ENST00000604855 2072 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 Y_RNA.97-201ENST00000363094 102 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 RNA5SP130-201ENST00000364431 114 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 SNORD3H-201ENST00000384486 214 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 Y_RNA.548-201ENST00000384656 105 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 EI24P1-201ENST00000416584 867 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 RPS6P12-201ENST00000432491 726 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 RPL23AP89-201ENST00000439324 255 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 COX6CP12-201ENST00000446748 202 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 NUTF2P7-201ENST00000453086 375 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 RPL31P3-201ENST00000458430 332 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 RNA5SP246-201ENST00000458909 119 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AC021382.1-201ENST00000483523 359 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 BNIP3P41-201ENST00000503774 571 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AC017037.2-201ENST00000513850 890 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 HIGD1AP10-201ENST00000527837 282 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AC091489.2-201ENST00000566263 604 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AP000403.1-201ENST00000603349 851 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AL365503.1-201ENST00000605247 905 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 BCRP9-201ENST00000605312 388 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AC091965.4-201ENST00000607691 587 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 AL359715.5-201ENST00000623431 443 ntBASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.92□□□□□ -1.78
HCN3Q9P1Z3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 AC004925.1-201ENST00000624256 2706 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 SNORD116-9-201ENST00000384000 95 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 RNU6-1181P-201ENST00000384191 106 ntBASIC3.91□□□□□ -1.78
HCN3Q9P1Z3 SNORD116-3-201ENST00000384287 95 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms