Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 AC107982.1-201ENST00000507171 1300 ntBASIC4.64□□□□□ -1.67
TFCP2L1Q9NZI6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
TFCP2L1Q9NZI6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.64□□□□□ -1.67
TFCP2L1Q9NZI6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TFCP2L1Q9NZI6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 SCN1A-220ENST00000641603 12506 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AP001273.1-201ENST00000624493 3152 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 RPL23AP57-201ENST00000332361 466 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 SUGT1P1-201ENST00000379514 476 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 SNORA75-201ENST00000384158 137 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AL450338.1-201ENST00000407987 512 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 RNU6-272P-201ENST00000411028 104 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 BX323014.1-201ENST00000412876 237 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 RPS24P8-201ENST00000431490 402 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AL513175.1-201ENST00000431492 780 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 B3GNT2P1-201ENST00000434960 952 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 COX6CP2-201ENST00000444980 225 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 RPL23AP35-201ENST00000451906 501 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 SNRPGP9-201ENST00000456025 225 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 NF1P3-201ENST00000457709 450 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 TPT1P7-201ENST00000458300 517 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 RN7SL429P-201ENST00000479090 223 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 RN7SL489P-201ENST00000486185 223 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 RN7SL327P-201ENST00000488659 223 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 RN7SL504P-201ENST00000494496 287 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AC005912.1-201ENST00000495392 255 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AC020893.1-201ENST00000502452 580 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 RNU6-720P-201ENST00000516363 108 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 SNORA48.10-201ENST00000516965 160 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 COX6B1P6-201ENST00000522347 255 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AP001189.2-201ENST00000527320 189 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AP000873.5-201ENST00000533906 236 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AL451007.1-201ENST00000595491 289 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AC090186.1-201ENST00000605991 572 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AC092354.1-201ENST00000606057 376 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AC091946.2-201ENST00000606105 291 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AC116312.1-201ENST00000606841 314 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AC100793.4-201ENST00000613683 429 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 RN7SL853P-201ENST00000617250 223 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AL590240.3-201ENST00000621416 943 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 LINC01355-201ENST00000566551 5444 ntBASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TFCP2L1Q9NZI6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 Y_RNA.18-201ENST00000362461 102 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 RNU6-433P-201ENST00000363216 104 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 Y_RNA.302-201ENST00000364997 102 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 AL663109.1-201ENST00000411498 844 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 USP9YP33-201ENST00000412220 421 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 GSTM3P2-201ENST00000412746 530 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 UBE2V1P10-201ENST00000414685 269 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 CDK8P2-201ENST00000415020 547 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 AC092634.6-201ENST00000418558 192 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 DBIP2-201ENST00000419076 262 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 MED14P1-201ENST00000430517 648 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 AL034418.1-201ENST00000448675 860 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 RNU6-1218P-201ENST00000458990 108 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 RPL31P61-201ENST00000496160 376 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 MTCYBP17-201ENST00000503579 789 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 AC113430.1-201ENST00000506872 718 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 HMGB1P28-201ENST00000507778 552 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 AC109458.1-201ENST00000508858 316 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 Vault.1-201ENST00000516474 102 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 RNU6-1261P-201ENST00000517194 104 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 AC008562.1-201ENST00000521763 330 ntBASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TFCP2L1Q9NZI6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms