Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 SEPT14P24-201ENST00000447236 180 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC008155.2-201ENST00000464337 397 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 RN7SL601P-201ENST00000471221 293 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 SNORA31.8-201ENST00000516327 108 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AP003049.1-201ENST00000529418 457 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AL391156.1-201ENST00000554965 554 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC093519.1-201ENST00000566109 298 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC005776.1-201ENST00000603164 290 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AC106791.2-201ENST00000604680 391 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 AP005229.2-201ENST00000609980 697 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 ZNF663P-202ENST00000641770 1131 ntBASIC3.1□□□□□ -1.91
KLHL28Q9NXS3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 RNU1-33P-201ENST00000364249 162 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 RNU6-805P-201ENST00000365643 106 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 U3.29-201ENST00000391296 212 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 RPL32P35-201ENST00000415214 394 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 OR1AA1P-201ENST00000419597 916 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 MTATP6P11-201ENST00000428071 670 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AL353705.1-201ENST00000433468 480 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 MTCYBP34-201ENST00000439552 670 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC000041.1-201ENST00000439655 175 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AL592437.1-201ENST00000443781 492 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AL096829.2-201ENST00000446582 742 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 MTND2P19-201ENST00000449129 1012 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 RNA5SP310-201ENST00000459084 116 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC084024.2-201ENST00000503480 791 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC093767.1-201ENST00000504523 156 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC091860.1-201ENST00000505723 432 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 MLLT10P2-201ENST00000506434 249 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC111000.2-201ENST00000507775 550 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 RNU6-334P-201ENST00000517072 102 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AP001804.3-201ENST00000525146 880 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 SNRPGP16-201ENST00000533275 226 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC018630.1-201ENST00000541376 925 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 SULT1C2P1-202ENST00000562418 459 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC034268.2-201ENST00000571784 482 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 MIR4666A-201ENST00000580160 79 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC067852.3-201ENST00000589177 561 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AL160281.1-201ENST00000605307 311 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 BNIP3P19-201ENST00000605397 577 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 uc_338.1-201ENST00000612113 180 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 VN1R74P-201ENST00000613259 503 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC091046.2-201ENST00000620775 665 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC073592.7-201ENST00000623659 507 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AC093875.1-201ENST00000623688 504 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AL512506.2-201ENST00000624472 458 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 AL356094.1-201ENST00000624663 1212 ntBASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
KLHL28Q9NXS3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
KLHL28Q9NXS3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
KLHL28Q9NXS3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
KLHL28Q9NXS3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.09□□□□□ -1.92
KLHL28Q9NXS3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.09□□□□□ -1.92
KLHL28Q9NXS3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 RNU6-839P-201ENST00000363347 108 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 U3.11-201ENST00000364476 212 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 SNORA14A-201ENST00000364773 135 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 OR6K3-202ENST00000368146 996 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 SNORA51.6-201ENST00000384151 125 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 AL024474.1-201ENST00000404655 591 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 BX323014.1-201ENST00000412876 237 ntBASIC3.08□□□□□ -1.92
KLHL28Q9NXS3 RPS7P13-201ENST00000413955 498 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms