Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL121772.2-201ENST00000614331 297 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 OR6C71P-202ENST00000641886 1107 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 AC007656.2-201ENST00000624902 4547 ntBASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BLOC1S4Q9NUP1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 ZNF876P-202ENST00000398732 1485 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 SNORA57.3-201ENST00000411095 141 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 RPL22P18-201ENST00000417197 377 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 ZYG11AP1-201ENST00000430329 837 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 BMS1P19-201ENST00000433925 393 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 MTCYBP34-201ENST00000439552 670 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 RSL24D1P3-201ENST00000449255 495 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 RPL23AP62-201ENST00000463396 453 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC078785.3-201ENST00000476607 425 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC104090.1-201ENST00000506341 1171 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC093677.1-201ENST00000514414 678 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC239860.2-201ENST00000525886 270 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AL121766.1-201ENST00000547436 487 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AL353997.4-201ENST00000586196 166 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AP001330.4-201ENST00000604350 154 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC095031.1-201ENST00000623685 672 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 AC244205.2-202ENST00000635781 342 ntBASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BLOC1S4Q9NUP1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC011477.1-204ENST00000623416 1325 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 FRG1BP-201ENST00000278882 761 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 OR5H2-201ENST00000355273 945 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 RNU4-28P-201ENST00000364739 141 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 RNU6-83P-201ENST00000384568 112 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 RNU6-952P-201ENST00000391164 108 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 RN7SKP159-201ENST00000410657 292 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 CYCSP19-201ENST00000411715 316 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 RAC1P3-201ENST00000416129 580 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 FGF7P5-201ENST00000441829 291 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 PAXBP1P1-201ENST00000449315 447 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 MEMO1P3-201ENST00000459811 302 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC106872.2-201ENST00000494303 480 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC021146.8-201ENST00000507455 733 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC093281.2-201ENST00000510153 597 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC024589.1-201ENST00000512207 263 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC110760.3-202ENST00000515177 371 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 RN7SKP13-201ENST00000515933 244 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AP001372.4-201ENST00000524889 472 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 GTF2IP22-201ENST00000554443 182 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AL596327.1-201ENST00000603629 213 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC011451.2-201ENST00000604303 598 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 RNU6-88P-201ENST00000606801 100 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AC106028.5-201ENST00000610332 395 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 AL732618.1-201ENST00000623251 301 ntBASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
BLOC1S4Q9NUP1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms