Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 EPS15P1-201ENST00000448836 336 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC073387.1-201ENST00000453261 709 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 RPS20P32-201ENST00000456044 356 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 RPL29P14-201ENST00000495837 428 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC068305.1-201ENST00000497406 726 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC078918.1-201ENST00000498515 228 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC108475.1-201ENST00000507880 950 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 CR383656.7-201ENST00000548164 174 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC084824.1-201ENST00000550917 1005 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AL121603.1-201ENST00000553815 142 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 MIR4307-201ENST00000582802 84 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC012669.1-201ENST00000603209 283 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC073114.1-201ENST00000612027 490 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AL590099.1-201ENST00000615276 138 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 Z69908.1-201ENST00000622603 247 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 AC011944.2-201ENST00000624440 683 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 BDP1P-201ENST00000582658 1990 ntBASIC3.8□□□□□ -1.8
SLC6A13Q9NSD5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 Y_RNA.77-201ENST00000362962 107 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 RNA5SP366-201ENST00000365454 123 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 RNU2-47P-201ENST00000410649 186 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 SEPT2P1-201ENST00000419651 180 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC109583.1-201ENST00000432156 268 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC108734.1-201ENST00000439549 399 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 RPS4XP4-201ENST00000443195 763 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC116337.2-201ENST00000477662 156 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC021382.1-201ENST00000483523 359 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC068587.1-201ENST00000483613 781 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC108064.1-201ENST00000513791 460 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 RNU6-1095P-201ENST00000516148 108 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 RNA5SP309-201ENST00000516670 106 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 MTCYBP41-201ENST00000528913 1123 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC126177.3-201ENST00000551839 688 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 PARP1P2-201ENST00000556806 195 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC009101.1-201ENST00000568135 242 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 XIAPP1-201ENST00000603162 600 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 HMGB1P50-201ENST00000605814 607 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC114781.5-201ENST00000615297 108 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC009090.3-201ENST00000616553 565 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AL359715.5-201ENST00000623431 443 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AC138649.5-201ENST00000637456 137 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AL365440.1-201ENST00000436135 2167 ntBASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A13Q9NSD5 AL157700.1-201ENST00000561973 1432 ntBASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 LARP1BP1-201ENST00000506036 1359 ntBASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 UBE3AP2-201ENST00000429033 2259 ntBASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 RNY4P24-201ENST00000362735 96 ntBASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 RNU5F-7P-201ENST00000363696 115 ntBASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 SNORA70.2-201ENST00000364506 135 ntBASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 AC068538.1-201ENST00000376856 336 ntBASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 RNU6-629P-201ENST00000384061 103 ntBASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 CYCSP46-201ENST00000423569 204 ntBASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC6A13Q9NSD5 KCTD9P3-201ENST00000434597 1169 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 710.5 ms