Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MTCO2P32-201ENST00000514865 403 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 SNORA48.10-201ENST00000516965 160 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 SULT1C2P1-202ENST00000562418 459 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AC067852.3-201ENST00000589177 561 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AC112220.2-201ENST00000605513 533 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AC024060.1-201ENST00000607052 494 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AL390240.1-201ENST00000612950 384 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AL391262.2-201ENST00000622466 494 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 SNORA50A-202ENST00000629536 136 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 AC099654.8-201ENST00000637757 681 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 MIR7153-201ENST00000637758 57 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 MFSD8-233ENST00000641482 4860 ntBASIC3.54□□□□□ -1.84
HPS4Q9NQG7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.54□□□□□ -1.84
HPS4Q9NQG7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AL645568.2-201ENST00000432815 1337 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 MTND4P9-201ENST00000507819 1346 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 RNU6-730P-201ENST00000383954 104 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 RNU6-224P-201ENST00000384055 107 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 RNU6-1181P-201ENST00000384191 106 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 RNU6-1300P-201ENST00000391046 108 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 EI24P2-201ENST00000397776 1076 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 MTCO3P1-205ENST00000422088 832 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AL513174.1-201ENST00000423182 629 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 RAC1P8-201ENST00000427086 527 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 MTCO1P3-201ENST00000429327 192 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AC093155.1-201ENST00000440164 826 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AC004022.1-201ENST00000447766 1066 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AL034418.1-201ENST00000448675 860 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 RN7SL504P-201ENST00000494496 287 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 RNU6-276P-201ENST00000516114 96 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 LRRC6P1-201ENST00000532188 885 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AL389895.1-201ENST00000554127 252 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 MTCYBP27-201ENST00000555160 670 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 MIR5680-201ENST00000577577 84 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AL669831.4-202ENST00000590817 238 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AL158050.2-201ENST00000605336 568 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AC092954.1-201ENST00000609121 445 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AC009269.6-201ENST00000621778 588 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AC104985.3-201ENST00000623479 597 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AC127502.3-201ENST00000636170 1206 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 ZNF663P-202ENST00000641770 1131 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.53□□□□□ -1.84
HPS4Q9NQG7 AC004925.1-201ENST00000624256 2706 ntBASIC3.53□□□□□ -1.84
HPS4Q9NQG7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
HPS4Q9NQG7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.53□□□□□ -1.85
HPS4Q9NQG7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 RNA5SP374-201ENST00000362939 125 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 SUGT1P1-201ENST00000379514 476 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 MIR634-201ENST00000385208 97 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 MIR620-201ENST00000385232 95 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AL121972.1-201ENST00000402023 252 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 MTND4LP20-201ENST00000402379 270 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 RNU4-78P-201ENST00000410940 126 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 FNDC3CP-201ENST00000420795 1155 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 DPRXP1-201ENST00000426312 460 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 RPL21P66-201ENST00000426566 466 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 GTF2IP3-201ENST00000433887 494 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 SEPT7P5-201ENST00000434048 306 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AC079776.3-201ENST00000450665 370 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AC006539.3-201ENST00000454258 129 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 MTATP6P14-201ENST00000455189 673 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 FCF1P6-201ENST00000456841 595 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AC079203.1-201ENST00000487972 404 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms