Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RPL9P7-201ENST00000330965 580 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-600P-201ENST00000362524 99 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-37P-201ENST00000362692 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 Y_RNA.209-201ENST00000364156 111 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-11P-201ENST00000364234 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-7-201ENST00000364784 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-8-201ENST00000365467 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-25P-201ENST00000383873 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-1-201ENST00000383898 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-48P-201ENST00000384161 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-36P-201ENST00000384172 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-4P-201ENST00000384205 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-5P-201ENST00000384238 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-3P-201ENST00000384314 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-16P-201ENST00000384385 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-15P-201ENST00000384534 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-2-201ENST00000384627 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-29P-201ENST00000384637 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-9-201ENST00000384776 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-33P-201ENST00000384793 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 SNORD56-201ENST00000413522 71 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AC007560.1-201ENST00000426912 237 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RPL21P91-201ENST00000429231 479 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AL513043.1-201ENST00000439124 535 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RPL9P32-201ENST00000464118 620 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RPL9P9-202ENST00000466501 579 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 CREM-230ENST00000474931 626 ntTSL 2 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 MTCO2P24-201ENST00000515611 426 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-1282P-201ENST00000516735 96 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU7-4P-201ENST00000516961 62 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AP006587.5-201ENST00000532033 739 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AP003115.1-201ENST00000569849 463 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 SIGLEC31P-201ENST00000594237 551 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AC013244.1-201ENST00000604279 193 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 AC123912.5-201ENST00000605470 343 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RNU6-6P-201ENST00000606623 107 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 UBE2Q2P6-201ENST00000612666 153 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 OR56B2P-202ENST00000641377 2453 ntBASIC7.59□□□□□ -1.19
RTN4Q9NQC3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RTN4Q9NQC3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
RTN4Q9NQC3 FAM35BP-202ENST00000497389 3337 ntBASIC7.58□□□□□ -1.2
RTN4Q9NQC3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 RNU6-1197P-201ENST00000391183 107 ntBASIC7.58□□□□□ -1.2
RTN4Q9NQC3 AC090114.1-201ENST00000393266 448 ntBASIC7.58□□□□□ -1.2
RTN4Q9NQC3 RNU2-23P-201ENST00000410545 195 ntBASIC7.58□□□□□ -1.2
RTN4Q9NQC3 AC243428.1-201ENST00000421099 264 ntBASIC7.58□□□□□ -1.2
RTN4Q9NQC3 AC098614.2-201ENST00000426040 255 ntBASIC7.58□□□□□ -1.2
RTN4Q9NQC3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 SNRPEP9-201ENST00000436794 238 ntBASIC7.58□□□□□ -1.2
RTN4Q9NQC3 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 RNU6-1137P-201ENST00000517073 99 ntBASIC7.58□□□□□ -1.2
RTN4Q9NQC3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 AC087588.2-201ENST00000617667 426 ntBASIC7.58□□□□□ -1.2
RTN4Q9NQC3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 RBPJP6-201ENST00000411556 1431 ntBASIC7.58□□□□□ -1.2
RTN4Q9NQC3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RTN4Q9NQC3 AC083899.1-201ENST00000454465 3819 ntBASIC7.57□□□□□ -1.2
RTN4Q9NQC3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms