Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 REREP1Y-201ENST00000422655 198 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 COX6CP13-201ENST00000428703 226 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 CYCSP12-201ENST00000437729 300 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 REREP2Y-201ENST00000439103 200 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC019185.1-201ENST00000442718 389 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC105399.1-202ENST00000447303 205 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC104058.1-201ENST00000448028 297 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AL356981.1-201ENST00000454879 684 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC004801.2-202ENST00000463559 283 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 ENPP7P9-201ENST00000514456 627 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 FAM60DP-201ENST00000524174 632 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 AL133271.1-201ENST00000538229 291 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC092470.1-201ENST00000546187 132 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 MIR4293-201ENST00000584305 78 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC092747.3-201ENST00000603769 301 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 NUTF2P8-201ENST00000604593 363 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 MIR8069-1-201ENST00000616627 86 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC007485.1-201ENST00000616755 206 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 U4.1-201ENST00000620349 87 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 MIR8069-2-201ENST00000621412 86 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AL357559.1-201ENST00000622228 274 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AC022418.1-201ENST00000624118 445 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 AP001052.1-201ENST00000626421 99 ntBASIC5.2□□□□□ -1.58
SSU72Q9NP77 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSU72Q9NP77 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSU72Q9NP77 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SSU72Q9NP77 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AL606537.1-201ENST00000607258 2011 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSU72Q9NP77 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSU72Q9NP77 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSU72Q9NP77 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSU72Q9NP77 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSU72Q9NP77 DHX9P1-201ENST00000436565 3076 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 Y_RNA.47-201ENST00000362697 108 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 Y_RNA.135-201ENST00000363439 95 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 RN7SKP292-201ENST00000365522 317 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 Y_RNA.557-201ENST00000384680 107 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 RNU6-278P-201ENST00000390945 109 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 SOD2P1-201ENST00000396543 562 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 HSPA8P15-201ENST00000401676 786 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC069213.2-201ENST00000420238 366 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 RPL7P46-201ENST00000425129 740 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC090686.1-201ENST00000481577 749 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC114781.3-201ENST00000512083 142 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC016065.2-201ENST00000514530 444 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 RN7SKP46-201ENST00000515942 234 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 RNU6-798P-201ENST00000516912 103 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 RNU6-64P-201ENST00000517119 105 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 SNORA43.3-201ENST00000517240 103 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC027308.1-201ENST00000517993 110 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC009902.1-201ENST00000519351 183 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 DEFB109D-201ENST00000529497 240 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSU72Q9NP77 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC138761.3-201ENST00000579993 334 ntBASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.19□□□□□ -1.58
SSU72Q9NP77 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms