Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
USP29Q9HBJ7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 RNU1-132P-201ENST00000364300 164 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AL024474.1-201ENST00000404655 591 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 MIR320C1-201ENST00000408566 88 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AC069218.2-201ENST00000411665 344 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 NUP35P2-201ENST00000416748 943 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 OR6K1P-201ENST00000456766 971 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 BTF3P5-201ENST00000457252 467 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AC017015.1-201ENST00000477387 286 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 RPS29P19-201ENST00000479709 171 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AC041039.1-201ENST00000485656 536 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AC106872.3-201ENST00000495104 446 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AC026402.1-201ENST00000513642 170 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AC016065.2-201ENST00000514530 444 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 RNA5SP519-201ENST00000516480 119 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 PAICSP4-201ENST00000517543 1253 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 OR5AP1P-201ENST00000529730 940 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AC016957.1-201ENST00000534895 309 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 OR8R1P-201ENST00000543943 764 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 AL445264.1-201ENST00000621719 171 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 FAM157B-203ENST00000639350 358 ntBASIC4.3□□□□□ -1.72
USP29Q9HBJ7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP29Q9HBJ7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 RNU1-13P-201ENST00000384499 162 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 SNORA40.3-201ENST00000390964 122 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 PPIAP31-201ENST00000405422 495 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 RNA5SP317-201ENST00000410176 116 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 RNA5SP311-201ENST00000411290 116 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AL513174.1-201ENST00000423182 629 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 COX6CP15-201ENST00000426313 211 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 OR4F13P-201ENST00000428478 931 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AC008065.1-201ENST00000428525 348 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 RPL23AP74-201ENST00000437246 471 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 DNAJC19P4-201ENST00000440115 345 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AL359073.1-201ENST00000448036 403 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 BX322784.1-201ENST00000455793 1077 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 SNRPFP4-201ENST00000456366 242 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 LARP1BP2-201ENST00000486594 519 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 RPL21P129-201ENST00000491732 478 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AC138853.1-201ENST00000503549 823 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AC008958.1-201ENST00000511047 682 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 KCTD9P2-201ENST00000512203 1013 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AF131216.2-201ENST00000512316 564 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 RNA5SP315-201ENST00000516340 116 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 RNA5SP312-201ENST00000517068 116 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AC107016.1-201ENST00000550463 337 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 MIR5186-201ENST00000577504 120 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AL591034.3-201ENST00000605511 685 ntBASIC4.29□□□□□ -1.72
USP29Q9HBJ7 AC113194.1-201ENST00000606037 500 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms