Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VCX3BQ9H321 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VCX3BQ9H321 RNA5SP50-201ENST00000363731 107 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 RNU6-891P-201ENST00000384280 111 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 RNU6-851P-201ENST00000384565 107 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.56□□□□□ -2
VCX3BQ9H321 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.56□□□□□ -2
VCX3BQ9H321 MORF4L1P7-201ENST00000426038 703 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 HSPD1P21-201ENST00000436541 245 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 Z99127.2-201ENST00000441426 334 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.56□□□□□ -2
VCX3BQ9H321 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.56□□□□□ -2
VCX3BQ9H321 RNU1-95P-201ENST00000516357 160 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 RNU1-128P-201ENST00000516704 160 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.56□□□□□ -2
VCX3BQ9H321 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.56□□□□□ -2
VCX3BQ9H321 OR5B10P-201ENST00000532869 642 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.56□□□□□ -2
VCX3BQ9H321 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.56□□□□□ -2
VCX3BQ9H321 AC011611.1-201ENST00000552179 197 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 AC023158.1-201ENST00000561632 1025 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.56□□□□□ -2
VCX3BQ9H321 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.56□□□□□ -2
VCX3BQ9H321 AC008745.1-201ENST00000604064 271 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 AC106900.2-201ENST00000604994 317 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 MIR6862-1-201ENST00000613016 70 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 MIR6862-2-201ENST00000614755 70 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.56□□□□□ -2
VCX3BQ9H321 CU459211.1-201ENST00000635667 749 ntBASIC2.56□□□□□ -2
VCX3BQ9H321 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VCX3BQ9H321 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.55□□□□□ -2
VCX3BQ9H321 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VCX3BQ9H321 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VCX3BQ9H321 RNU1-32P-201ENST00000363937 159 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 SNORA5A-201ENST00000384111 134 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 AF274854.1-201ENST00000413236 615 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 RPF2P1-201ENST00000424137 906 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.55□□□□□ -2
VCX3BQ9H321 MRPS33P4-201ENST00000434892 317 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.55□□□□□ -2
VCX3BQ9H321 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.55□□□□□ -2
VCX3BQ9H321 NIPA2P5-201ENST00000452282 464 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.55□□□□□ -2
VCX3BQ9H321 AC010099.1-201ENST00000455434 375 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 AL135752.1-201ENST00000479477 471 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 RN7SL293P-201ENST00000481765 281 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 AC021087.2-201ENST00000504656 1203 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.55□□□□□ -2
VCX3BQ9H321 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.55□□□□□ -2
VCX3BQ9H321 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.55□□□□□ -2
VCX3BQ9H321 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.55□□□□□ -2
VCX3BQ9H321 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.55□□□□□ -2
VCX3BQ9H321 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.55□□□□□ -2
VCX3BQ9H321 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.55□□□□□ -2
VCX3BQ9H321 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.55□□□□□ -2
VCX3BQ9H321 DPRXP5-201ENST00000604662 539 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 AC106028.5-201ENST00000610332 395 ntBASIC2.55□□□□□ -2
VCX3BQ9H321 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC2.55□□□□□ -2
VCX3BQ9H321 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
VCX3BQ9H321 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
VCX3BQ9H321 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VCX3BQ9H321 AC012321.1-201ENST00000561622 1588 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 RNA5SP124-201ENST00000362739 110 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 RNU6-1249P-201ENST00000363237 111 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.54□□□□□ -2
VCX3BQ9H321 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.54□□□□□ -2
VCX3BQ9H321 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.54□□□□□ -2
VCX3BQ9H321 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.54□□□□□ -2
VCX3BQ9H321 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.54□□□□□ -2
VCX3BQ9H321 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 AL445687.1-201ENST00000439946 251 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 AC009296.1-201ENST00000443146 155 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 AL359073.1-201ENST00000448036 403 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 AL627224.1-201ENST00000448334 444 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 AL139109.1-201ENST00000455491 297 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 AC092798.1-201ENST00000458542 409 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 RN7SKP122-201ENST00000515923 296 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 C1GALT1P3-201ENST00000522049 819 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VCX3BQ9H321 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.54□□□□□ -2
VCX3BQ9H321 AL356280.1-201ENST00000603614 379 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 AL590392.1-201ENST00000604960 446 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.54□□□□□ -2
VCX3BQ9H321 AC245884.12-201ENST00000615364 59 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 AC006338.2-201ENST00000616864 791 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 ZYXP1-201ENST00000617638 118 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 CYP3A51P-201ENST00000633513 256 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 ZNF285B-201ENST00000561698 1767 ntBASIC2.54□□□□□ -2
VCX3BQ9H321 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VCX3BQ9H321 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.53□□□□□ -2
VCX3BQ9H321 FRG1BP-201ENST00000278882 761 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 RNU6-461P-201ENST00000364195 107 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 U8.8-201ENST00000365399 135 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 RNU4-72P-201ENST00000410754 173 ntBASIC2.53□□□□□ -2
VCX3BQ9H321 AL513331.1-201ENST00000411908 397 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms