Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AC114322.1-201ENST00000506771 926 ntBASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 MTCYBP16-201ENST00000509187 1129 ntBASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 RNU6-1261P-201ENST00000517194 104 ntBASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 ZNF705CP-201ENST00000530515 889 ntBASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 AC091057.2-201ENST00000602594 792 ntBASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 AC093424.1-201ENST00000604999 338 ntBASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 AC011330.2-201ENST00000621680 635 ntBASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 AC092184.1-201ENST00000625042 715 ntBASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 AC011978.2-201ENST00000569835 2054 ntBASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 AC109315.1-201ENST00000584143 1347 ntBASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF541Q9H0D2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 RNA5SP502-201ENST00000362694 119 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AL133384.1-201ENST00000412744 351 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 RPS12P23-201ENST00000419579 400 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC112198.1-201ENST00000505369 1220 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC109445.1-201ENST00000512356 383 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC008885.1-201ENST00000514930 301 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 FABP5P12-201ENST00000515543 389 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 RNA5SP356-201ENST00000515972 94 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 RN7SKP287-201ENST00000516546 266 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 EEF1A1P37-201ENST00000522748 715 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC092470.1-201ENST00000546187 132 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 HIGD1AP1-201ENST00000550979 275 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AL157394.1-201ENST00000562983 1224 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 KLKP1-201ENST00000595979 403 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 BNIP3P38-201ENST00000601117 544 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 LLPHP1-201ENST00000603571 367 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 OR2AS2P-201ENST00000606902 342 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AL451074.6-201ENST00000608512 729 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC140725.3-201ENST00000616193 880 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 MKKS-204ENST00000639674 192 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 CDR1-202ENST00000625883 1485 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 AC117529.2-201ENST00000512159 2068 ntBASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF541Q9H0D2 U3.15-201ENST00000365398 212 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 SNORA70E-201ENST00000384492 135 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF541Q9H0D2 Z99755.1-201ENST00000414048 380 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 XKRYP1-201ENST00000423438 492 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 XKRYP2-201ENST00000432915 492 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4□□□□□ -1.77
ZNF541Q9H0D2 SETP5-201ENST00000437270 562 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC092757.1-201ENST00000467293 467 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC021146.5-201ENST00000503544 545 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4□□□□□ -1.77
ZNF541Q9H0D2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC009097.3-201ENST00000563557 1018 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4□□□□□ -1.77
ZNF541Q9H0D2 MTATP6P24-201ENST00000576835 677 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC004987.4-201ENST00000603383 338 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC025588.2-201ENST00000604851 466 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC010680.4-201ENST00000605334 543 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4□□□□□ -1.77
ZNF541Q9H0D2 AL139811.1-201ENST00000424779 2299 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC005539.1-201ENST00000443768 1479 ntBASIC4□□□□□ -1.77
ZNF541Q9H0D2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF541Q9H0D2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4□□□□□ -1.77
ZNF541Q9H0D2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
ZNF541Q9H0D2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF541Q9H0D2 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 HMGN2P8-201ENST00000391458 268 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 SNRPEP2-201ENST00000397592 279 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 RNA5SP239-201ENST00000410218 129 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AC006960.1-201ENST00000419980 153 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 RPL21P109-201ENST00000422213 475 ntBASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF541Q9H0D2 OOSP1P1-201ENST00000423265 274 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms