Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC073264.2-201ENST00000448886 166 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 RPL7P52-201ENST00000449200 742 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 MTND1P12-201ENST00000455231 147 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC011005.3-201ENST00000491624 395 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 Y_RNA.693-201ENST00000516641 110 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AP003034.1-201ENST00000534621 422 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC024224.1-201ENST00000538284 609 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC107954.1-201ENST00000565906 727 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC136624.4-201ENST00000573044 370 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC091178.1-203ENST00000584586 279 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 BNIP3P33-201ENST00000598912 569 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC008745.1-201ENST00000604064 271 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AC012409.3-201ENST00000611343 981 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 AL596245.1-201ENST00000618994 362 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.28□□□□□ -1.72
AMBRA1Q9C0C7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC006971.1-201ENST00000407916 4486 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 Y_RNA.295-201ENST00000364918 102 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 RNU6-282P-201ENST00000365357 103 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 RNU6-1207P-201ENST00000384343 107 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AL049693.1-201ENST00000402760 611 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC009237.5-201ENST00000414271 501 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC127537.2-201ENST00000439258 465 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 RPL23AP20-201ENST00000447965 421 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 snoU13.8-201ENST00000458890 104 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC117522.1-201ENST00000509821 380 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC016065.2-201ENST00000514530 444 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 Y_RNA.704-201ENST00000516851 102 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 MTND1P35-201ENST00000526739 508 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AL512310.1-201ENST00000548639 172 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 MIR3667-201ENST00000581025 74 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC008752.3-201ENST00000588113 712 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC008782.1-201ENST00000603386 430 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AL391646.1-201ENST00000603860 190 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC008536.2-201ENST00000607284 349 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 AL391684.1-202ENST00000641293 1636 ntBASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
AMBRA1Q9C0C7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 DDX18P3-201ENST00000404856 2007 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 MTND5P33-201ENST00000571250 1450 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 AC067945.1-201ENST00000342609 618 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 RNA5SP258-201ENST00000362750 119 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 Y_RNA.89-201ENST00000363031 102 ntBASIC4.26□□□□□ -1.73
AMBRA1Q9C0C7 RNA5SP22-201ENST00000365393 109 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms