Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 Y_RNA.58-201ENST00000362807 102 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 Y_RNA.154-201ENST00000363624 102 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 RNY3P1-201ENST00000365085 102 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 RNY3-201ENST00000365484 102 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 SNORA69-201ENST00000383895 132 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 RNU6-730P-201ENST00000383954 104 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 Y_RNA.419-201ENST00000384041 102 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 RNU6-74P-201ENST00000384235 107 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 Y_RNA.490-201ENST00000384413 102 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 RNU6-738P-201ENST00000384531 106 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AL161631.1-201ENST00000417933 486 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AL353777.1-201ENST00000425552 326 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 snoU13.22-201ENST00000459428 104 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC010301.1-201ENST00000473936 355 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 RNU6-277P-201ENST00000516272 106 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC034105.3-201ENST00000565294 442 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC053481.3-201ENST00000577881 843 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AL603758.1-201ENST00000618654 241 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC112484.5-201ENST00000624189 228 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 TPTEP1-208ENST00000636884 213 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC010149.2-201ENST00000637608 315 ntBASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP4Q9C0A0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AC027228.2-201ENST00000567141 2154 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AC133552.1-201ENST00000569988 4007 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AC006971.1-201ENST00000407916 4486 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 RNU6-289P-201ENST00000364093 107 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 RNU6-225P-201ENST00000384613 103 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AC009161.1-201ENST00000417306 376 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AL031663.1-201ENST00000437445 219 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 RPS27AP17-201ENST00000463344 455 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AC104563.1-201ENST00000476147 376 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 RNA5SP49-201ENST00000516450 115 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 RNU7-30P-201ENST00000516835 62 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AC006504.6-201ENST00000590142 199 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AC112200.1-201ENST00000625015 234 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AC134503.1-201ENST00000633048 54 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 VPS35P1-201ENST00000563400 1518 ntBASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP4Q9C0A0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 RPL23AP57-201ENST00000332361 466 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 Y_RNA.46-201ENST00000362695 102 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 Y_RNA.67-201ENST00000362870 100 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 RNU6-1097P-201ENST00000363586 107 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 RN7SKP186-201ENST00000365371 303 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 Y_RNA.384-201ENST00000383909 102 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 RNU6-456P-201ENST00000384493 107 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AL583835.1-201ENST00000399570 407 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 RN7SKP202-201ENST00000410439 330 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 RNA5SP44-201ENST00000410446 133 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 TPMTP2-201ENST00000414372 726 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AC006946.1-201ENST00000429106 328 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 RPL36AP53-201ENST00000432891 316 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 RPL37P3-201ENST00000456825 293 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 RPL7P15-201ENST00000461190 712 ntBASIC5.61□□□□□ -1.51
CNTNAP4Q9C0A0 RPS15AP17-201ENST00000470598 390 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms