Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 MTCO1P17-201ENST00000411522 491 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AL389915.1-201ENST00000422463 466 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 MTND4LP16-201ENST00000440828 295 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 SNRPEP8-201ENST00000442866 260 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 MTND3P10-201ENST00000450967 341 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 UBDP1-202ENST00000457888 382 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AC010307.1-201ENST00000467206 836 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 LARP1BP2-201ENST00000486594 519 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AL035404.1-201ENST00000497982 568 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AC091133.4-201ENST00000511142 308 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 RNU6-314P-201ENST00000516574 104 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AC239860.2-201ENST00000525886 270 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AC022882.1-201ENST00000532142 501 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AP002453.2-201ENST00000533503 320 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AC090312.2-201ENST00000582687 378 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AL596327.1-201ENST00000603629 213 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 SEPT7P9-203ENST00000604116 343 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AL591424.2-201ENST00000617023 128 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 AL161637.1-201ENST00000622380 412 ntBASIC4.71□□□□□ -1.66
SALL3Q9BXA9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SALL3Q9BXA9 LINC00561-201ENST00000565815 2738 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 MTND4P29-201ENST00000503122 1372 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 DDX18P3-201ENST00000404856 2007 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AL359837.1-201ENST00000381357 287 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 HMGN2P8-201ENST00000391458 268 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC007066.1-201ENST00000392902 381 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AL445189.1-201ENST00000405722 338 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 MIR1277-201ENST00000408536 78 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AL451062.2-201ENST00000427515 271 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 NPM1P24-201ENST00000428039 894 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 PSPHP1-201ENST00000450062 261 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 RPL23AP71-201ENST00000470966 469 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AP000797.1-201ENST00000478870 387 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 PPIAP15-201ENST00000479662 484 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 FAM92A1P2-202ENST00000504766 877 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC048346.1-201ENST00000510247 144 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC114781.4-201ENST00000513707 639 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 Y_RNA.702-201ENST00000516843 96 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 MIR2116-201ENST00000517221 80 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC007991.1-201ENST00000522680 631 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC007224.1-201ENST00000564410 144 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC120057.2-201ENST00000571520 271 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC090578.1-201ENST00000604955 591 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 SNORA62.6-201ENST00000606322 83 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC023043.4-201ENST00000612081 449 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC091834.1-201ENST00000614543 472 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC006338.1-201ENST00000618453 749 ntBASIC4.7□□□□□ -1.66
SALL3Q9BXA9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SALL3Q9BXA9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 Z82217.1-201ENST00000625157 8149 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC093535.2-201ENST00000624769 2326 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SALL3Q9BXA9 RNA5SP322-201ENST00000363617 119 ntBASIC4.69□□□□□ -1.66
SALL3Q9BXA9 SNORA62.2-201ENST00000364672 152 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms