Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SSX3Q99909 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.31□□□□□ -1.88
SSX3Q99909 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
SSX3Q99909 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX3Q99909 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
SSX3Q99909 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX3Q99909 AC097714.1-201ENST00000511272 1647 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX3Q99909 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSX3Q99909 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX3Q99909 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SSX3Q99909 AL031679.1-201ENST00000400616 525 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX3Q99909 AC245052.5-201ENST00000416320 649 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AC006960.1-201ENST00000419980 153 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AL691449.1-201ENST00000426570 421 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 RPL7P2-201ENST00000427639 268 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX3Q99909 AC087650.1-201ENST00000431445 468 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 RPL21P89-201ENST00000444021 467 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 Z73417.1-201ENST00000447373 778 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AP001992.1-205ENST00000462248 379 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 RPS4XP10-201ENST00000465034 731 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 ST13P14-201ENST00000474095 734 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX3Q99909 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX3Q99909 FAM172BP-201ENST00000487497 1089 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX3Q99909 AC023424.2-201ENST00000493479 777 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 RPL31P61-201ENST00000496160 376 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.3□□□□□ -1.88
SSX3Q99909 COX7A2P2-201ENST00000505291 250 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AC093824.1-201ENST00000508796 343 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.3□□□□□ -1.88
SSX3Q99909 AP001804.3-201ENST00000525146 880 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 DEFB131D-201ENST00000526803 184 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.3□□□□□ -1.88
SSX3Q99909 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX3Q99909 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX3Q99909 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.3□□□□□ -1.88
SSX3Q99909 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.3□□□□□ -1.88
SSX3Q99909 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX3Q99909 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX3Q99909 MED28P6-201ENST00000558776 231 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.3□□□□□ -1.88
SSX3Q99909 AC025627.2-201ENST00000576220 160 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 MIR5186-201ENST00000577504 120 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX3Q99909 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX3Q99909 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.3□□□□□ -1.88
SSX3Q99909 VN1R78P-201ENST00000597393 564 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 MIR6875-201ENST00000617506 72 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AP000484.1-201ENST00000620067 1252 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AC018816.2-201ENST00000621460 353 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SSX3Q99909 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.3□□□□□ -1.88
SSX3Q99909 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSX3Q99909 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX3Q99909 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX3Q99909 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX3Q99909 AL645937.1-201ENST00000641739 1652 ntBASIC3.3□□□□□ -1.88
SSX3Q99909 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
SSX3Q99909 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.29□□□□□ -1.88
SSX3Q99909 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SSX3Q99909 AC007496.3-201ENST00000624987 3443 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSX3Q99909 SNORD35B-201ENST00000363660 87 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
SSX3Q99909 SNORA37-201ENST00000384504 129 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 RNU6-83P-201ENST00000384568 112 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 MIR184-201ENST00000384962 84 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 U3.42-201ENST00000408746 214 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX3Q99909 USP9YP33-201ENST00000412220 421 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 TPT1P2-201ENST00000413105 503 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 AC017079.2-201ENST00000416102 485 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 OR1AA1P-201ENST00000419597 916 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSX3Q99909 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX3Q99909 USP9YP35-201ENST00000435696 412 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 MUPP-201ENST00000438111 566 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 MTCYBP34-201ENST00000439552 670 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX3Q99909 ARPC3P5-201ENST00000448802 534 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX3Q99909 RNA5SP310-201ENST00000459084 116 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 RN7SL132P-201ENST00000478131 296 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX3Q99909 RN7SL271P-201ENST00000487601 295 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX3Q99909 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX3Q99909 AC021146.8-201ENST00000507455 733 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 MTND4LP22-201ENST00000508209 276 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.29□□□□□ -1.88
SSX3Q99909 MTND4LP31-201ENST00000514859 294 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 RN7SKP265-201ENST00000516448 223 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SSX3Q99909 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.29□□□□□ -1.88
SSX3Q99909 HSPE1P5-201ENST00000561489 272 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms