Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 Y_RNA.25-201ENST00000362528 102 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 RNU6-83P-201ENST00000384568 112 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 AC010099.3-201ENST00000423896 409 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 USP9YP11-201ENST00000427537 717 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.83□□□□□ -1.8
RAD9AQ99638 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.83□□□□□ -1.8
RAD9AQ99638 ATP5F1P1-201ENST00000433775 569 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 NPM1P49-201ENST00000448027 714 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.83□□□□□ -1.8
RAD9AQ99638 RPL21P134-201ENST00000453468 483 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 NCOR1P1-202ENST00000486162 291 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 AC093663.1-201ENST00000497190 394 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 MTCYBP35-201ENST00000503630 1137 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 USP9YP5-201ENST00000511770 630 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 PHBP14-201ENST00000512887 367 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.83□□□□□ -1.8
RAD9AQ99638 AC023538.1-201ENST00000534576 736 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.83□□□□□ -1.8
RAD9AQ99638 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.83□□□□□ -1.8
RAD9AQ99638 AC092470.1-201ENST00000546187 132 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAD9AQ99638 AC010198.2-201ENST00000550612 259 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.83□□□□□ -1.8
RAD9AQ99638 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.83□□□□□ -1.8
RAD9AQ99638 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.83□□□□□ -1.8
RAD9AQ99638 VN1R78P-201ENST00000597393 564 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 AC080013.3-201ENST00000606839 578 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 AC011816.2-201ENST00000607089 556 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 AP002791.1-201ENST00000623291 381 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 AP003355.3-201ENST00000623465 114 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 AC048347.1-201ENST00000624621 427 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.83□□□□□ -1.8
RAD9AQ99638 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.83□□□□□ -1.8
RAD9AQ99638 USP8P1-201ENST00000494673 3183 ntBASIC3.83□□□□□ -1.8
RAD9AQ99638 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAD9AQ99638 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RAD9AQ99638 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAD9AQ99638 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RAD9AQ99638 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.82□□□□□ -1.8
RAD9AQ99638 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RAD9AQ99638 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.82□□□□□ -1.8
RAD9AQ99638 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.82□□□□□ -1.8
RAD9AQ99638 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.82□□□□□ -1.8
RAD9AQ99638 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RAD9AQ99638 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.82□□□□□ -1.8
RAD9AQ99638 MTND2P16-201ENST00000419987 799 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.82□□□□□ -1.8
RAD9AQ99638 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.82□□□□□ -1.8
RAD9AQ99638 AC091862.1-201ENST00000438016 1100 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.82□□□□□ -1.8
RAD9AQ99638 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.82□□□□□ -1.8
RAD9AQ99638 RPL23AP62-201ENST00000463396 453 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 SNRPGP3-201ENST00000469405 227 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.82□□□□□ -1.8
RAD9AQ99638 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.82□□□□□ -1.8
RAD9AQ99638 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.82□□□□□ -1.8
RAD9AQ99638 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.82□□□□□ -1.8
RAD9AQ99638 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.82□□□□□ -1.8
RAD9AQ99638 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAD9AQ99638 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.82□□□□□ -1.8
RAD9AQ99638 RNU5A-4P-201ENST00000516588 111 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.82□□□□□ -1.8
RAD9AQ99638 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.82□□□□□ -1.8
RAD9AQ99638 AC090502.2-201ENST00000549267 280 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 AL389895.1-201ENST00000554127 252 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.82□□□□□ -1.8
RAD9AQ99638 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.82□□□□□ -1.8
RAD9AQ99638 MIR5680-201ENST00000577577 84 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.82□□□□□ -1.8
RAD9AQ99638 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.82□□□□□ -1.8
RAD9AQ99638 AL606834.2-201ENST00000602954 668 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 AL009028.1-201ENST00000604895 802 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 AC110741.2-201ENST00000605278 268 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 Z99289.3-201ENST00000605586 594 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 U4.6-201ENST00000621618 127 ntBASIC3.82□□□□□ -1.8
RAD9AQ99638 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAD9AQ99638 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RAD9AQ99638 MTCO1P24-201ENST00000515438 1558 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 PABPC1P7-201ENST00000413177 1513 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 CDR1-202ENST00000625883 1485 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.81□□□□□ -1.8
RAD9AQ99638 FAM133CP-201ENST00000332869 704 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 RNU6-216P-201ENST00000363282 104 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAD9AQ99638 HLFP1-201ENST00000402375 499 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 RNU2-28P-201ENST00000410457 189 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 BX323014.1-201ENST00000412876 237 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RAD9AQ99638 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.81□□□□□ -1.8
RAD9AQ99638 AC005005.2-201ENST00000420779 380 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 AC087650.1-201ENST00000431445 468 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 AC006028.1-201ENST00000438379 402 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 AL831737.1-201ENST00000441288 271 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.81□□□□□ -1.8
RAD9AQ99638 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.81□□□□□ -1.8
RAD9AQ99638 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.81□□□□□ -1.8
RAD9AQ99638 AL590399.6-201ENST00000446396 307 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 AC099563.1-201ENST00000456086 418 ntBASIC3.81□□□□□ -1.8
RAD9AQ99638 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms