Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SMARCE1Q969G3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SMARCE1Q969G3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AL022578.1-201ENST00000439330 1433 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 ZYG11AP1-201ENST00000430329 837 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 UBE2D3P1-201ENST00000436669 444 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AL591503.2-201ENST00000442314 1005 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 HMGN2P21-201ENST00000447764 270 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AC009220.1-201ENST00000451614 275 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AL445669.2-201ENST00000454425 421 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 USP9YP10-201ENST00000454868 628 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AC010468.1-201ENST00000461022 817 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AP000873.1-201ENST00000463987 400 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 MRPS33P3-201ENST00000513456 322 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 RNU6-27P-201ENST00000516146 107 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AC020914.6-201ENST00000594327 272 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AC022146.1-201ENST00000595307 847 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AC006077.1-201ENST00000604746 343 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 RNU1-30P-201ENST00000606575 163 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AC004009.2-201ENST00000623016 728 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 AC079228.1-201ENST00000624774 1049 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 RNA5SP196-201ENST00000625967 102 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 MTND2P41-201ENST00000637599 773 ntBASIC4.06□□□□□ -1.76
SMARCE1Q969G3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SMARCE1Q969G3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 RNU6-343P-201ENST00000364709 104 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC068538.1-201ENST00000376856 336 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 RNU6-952P-201ENST00000391164 108 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 RNU6-628P-201ENST00000410675 107 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 TPMTP2-201ENST00000414372 726 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC006548.1-201ENST00000427470 102 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 C4BPAP2-201ENST00000428434 478 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC084357.1-201ENST00000473404 255 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 VN1R105P-201ENST00000486595 910 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC104685.1-201ENST00000502445 371 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC010486.2-201ENST00000505572 483 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 LTV1P1-201ENST00000510683 1237 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 MTCYBP43-201ENST00000513621 740 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 RN7SKP60-201ENST00000516985 239 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 MIR2116-201ENST00000517221 80 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC024224.1-201ENST00000538284 609 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC008015.1-201ENST00000555505 465 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC053481.4-201ENST00000583164 216 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 MIR5187-201ENST00000583479 76 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AL596327.1-201ENST00000603629 213 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AL357094.1-201ENST00000603845 844 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC025811.1-201ENST00000604312 472 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC018714.1-201ENST00000605028 208 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC083809.1-201ENST00000615051 472 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 AC091925.2-201ENST00000625059 256 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 CR381572.1-201ENST00000625098 102 ntBASIC4.05□□□□□ -1.76
SMARCE1Q969G3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMARCE1Q969G3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SMARCE1Q969G3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.04□□□□□ -1.76
SMARCE1Q969G3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms