Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRF1Q92994 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRF1Q92994 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRF1Q92994 MTND5P33-201ENST00000571250 1450 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRF1Q92994 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
BRF1Q92994 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
BRF1Q92994 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
BRF1Q92994 RNU1-20P-201ENST00000363314 162 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 RNU6-1097P-201ENST00000363586 107 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 Y_RNA.166-201ENST00000363730 102 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 RNU6-169P-201ENST00000365336 107 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRF1Q92994 RNU6-373P-201ENST00000411247 98 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.34□□□□□ -1.55
BRF1Q92994 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF1Q92994 RPL23AP93-201ENST00000440847 484 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF1Q92994 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF1Q92994 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.34□□□□□ -1.55
BRF1Q92994 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
BRF1Q92994 RN7SL346P-201ENST00000491561 294 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF1Q92994 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
BRF1Q92994 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF1Q92994 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF1Q92994 NPM1P41-201ENST00000512920 831 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 SNORA40.12-201ENST00000516329 111 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF1Q92994 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF1Q92994 AC107934.1-201ENST00000522215 217 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF1Q92994 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF1Q92994 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF1Q92994 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF1Q92994 RPL21P7-201ENST00000557463 483 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 AL356432.3-201ENST00000568952 465 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 MIR4504-201ENST00000577413 92 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 AC053481.3-201ENST00000577881 843 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.34□□□□□ -1.55
BRF1Q92994 RN7SL690P-201ENST00000582087 240 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF1Q92994 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.34□□□□□ -1.55
BRF1Q92994 AC025449.1-201ENST00000603896 529 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 AL355472.4-201ENST00000610233 626 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 DISC2.1-201ENST00000612827 205 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 AL158801.5-201ENST00000623123 465 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 AC112204.3-201ENST00000623822 332 ntBASIC5.34□□□□□ -1.55
BRF1Q92994 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.34□□□□□ -1.55
BRF1Q92994 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.34□□□□□ -1.55
BRF1Q92994 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRF1Q92994 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRF1Q92994 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRF1Q92994 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
BRF1Q92994 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF1Q92994 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRF1Q92994 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
BRF1Q92994 AL592148.3-201ENST00000608771 2646 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRF1Q92994 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF1Q92994 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRF1Q92994 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRF1Q92994 RN7SKP103-201ENST00000363848 320 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 SNORA69-201ENST00000383895 132 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 Y_RNA.548-201ENST00000384656 105 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 RNA5SP397-201ENST00000391323 118 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRF1Q92994 AL356421.1-201ENST00000403255 413 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 AL356057.2-201ENST00000403318 432 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 RNA5SP296-201ENST00000410523 111 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF1Q92994 AC073136.2-201ENST00000417282 849 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 AL606489.2-201ENST00000433886 234 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 AL359265.2-201ENST00000434367 631 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 LYPLA1P1-201ENST00000434514 622 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 AC016691.1-201ENST00000441321 413 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.33□□□□□ -1.56
BRF1Q92994 AC104073.1-201ENST00000451988 151 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 RN7SL817P-201ENST00000480777 288 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 RPL23AP41-201ENST00000484754 458 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 FTH1P24-201ENST00000503502 462 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 RFPL4AP5-201ENST00000514977 504 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.33□□□□□ -1.56
BRF1Q92994 IGKV1-32-201ENST00000519290 311 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF1Q92994 AC022616.3-201ENST00000523940 148 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 AP001781.1-201ENST00000530977 207 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BRF1Q92994 PDCD5P1-201ENST00000543528 309 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 GSTP1P1-201ENST00000548078 319 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.33□□□□□ -1.56
BRF1Q92994 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF1Q92994 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.33□□□□□ -1.56
BRF1Q92994 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.33□□□□□ -1.56
BRF1Q92994 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.33□□□□□ -1.56
BRF1Q92994 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF1Q92994 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF1Q92994 AC100827.5-201ENST00000615883 426 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 AC024940.5-201ENST00000622889 474 ntBASIC5.33□□□□□ -1.56
BRF1Q92994 AC000123.2-201ENST00000623124 461 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms