Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL133384.1-201ENST00000412744 351 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 NUP35P2-201ENST00000416748 943 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC068287.1-201ENST00000430283 295 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 MRPS10P2-201ENST00000431226 381 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC006011.1-201ENST00000442758 349 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 KLF3P2-201ENST00000465138 268 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC126182.1-201ENST00000478134 357 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 TMEM251P1-201ENST00000503717 318 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 IGKV2-38-201ENST00000517443 247 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 PAICSP4-201ENST00000517543 1253 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC104986.1-201ENST00000517978 436 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 MTND4LP18-201ENST00000526864 291 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC008127.2-201ENST00000549925 1075 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 EEF1B2P4-201ENST00000551398 348 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 LSM6P2-201ENST00000552208 177 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AL133241.1-201ENST00000556832 487 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AL133457.1-201ENST00000564251 987 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC009101.1-201ENST00000568135 242 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 LARP7P2-201ENST00000575306 125 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 MIR5186-201ENST00000577504 120 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AP001180.3-201ENST00000582221 145 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 MAGOH2P-202ENST00000584384 429 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 BNIP3P8-201ENST00000597863 560 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC008745.1-201ENST00000604064 271 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC024941.1-201ENST00000612250 334 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC091834.1-201ENST00000614543 472 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 U7.8-201ENST00000619968 63 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AP000843.1-201ENST00000624880 701 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AP005264.7-201ENST00000625003 745 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 MTND5P26-201ENST00000426018 1752 ntBASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP4Q8N3C7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 ARF4P3-201ENST00000397387 509 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 HMGB1P17-201ENST00000403495 628 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 Y_RNA.604-201ENST00000410574 102 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 MTND1P21-201ENST00000412991 285 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 RWDD4P2-201ENST00000426392 563 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 OR4F13P-201ENST00000428478 931 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 NPM1P34-201ENST00000428821 893 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 COX6B1P7-201ENST00000430845 235 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 RPL23AP46-201ENST00000438548 490 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 CEACAMP9-201ENST00000442990 513 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 RPS26P56-201ENST00000444468 240 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC009963.2-201ENST00000453431 138 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 snoU109.1-201ENST00000459339 135 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 RPS20P21-201ENST00000466859 343 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 RN7SL303P-201ENST00000469773 251 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC087879.1-201ENST00000474343 374 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 RPL7P24-201ENST00000493052 752 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC023424.2-201ENST00000493479 777 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC106872.3-201ENST00000495104 446 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 NDUFB4P2-201ENST00000509515 391 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC099522.1-202ENST00000514718 367 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 RNU6-506P-201ENST00000516553 94 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 RNU7-143P-201ENST00000516781 65 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 ZNF705CP-201ENST00000530515 889 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 CCNG2P1-201ENST00000549521 1000 ntBASIC3.79□□□□□ -1.8
CLIP4Q8N3C7 AC007424.1-203ENST00000554613 687 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms