Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 RNA5SP124-201ENST00000362739 110 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 RNU6-173P-201ENST00000364215 104 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AL356131.1-201ENST00000405826 414 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 MIR1183-201ENST00000408856 89 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AC006960.1-201ENST00000419980 153 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AC069157.1-201ENST00000421749 137 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AL591419.1-201ENST00000427423 339 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 RPL23AP62-201ENST00000463396 453 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 RPL7L1P8-201ENST00000469911 741 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AC093278.1-201ENST00000494700 600 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AC020699.1-201ENST00000505161 445 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AC093281.2-201ENST00000510153 597 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 RNU1-95P-201ENST00000516357 160 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 RNU1-128P-201ENST00000516704 160 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 SUMO2P20-201ENST00000520803 283 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 CYCSP2-201ENST00000558168 301 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 MIR3944-201ENST00000581277 108 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AP001029.3-201ENST00000588063 596 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 DUXAP11-201ENST00000603858 526 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AL163642.2-201ENST00000604722 1019 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AP002782.1-201ENST00000623107 614 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AP000776.1-201ENST00000530032 1663 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PRPF39Q86UA1 AL022578.1-201ENST00000439330 1433 ntBASIC3.87□□□□□ -1.79
PRPF39Q86UA1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 SNORD6-201ENST00000365444 73 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 MIR7-3-201ENST00000384898 110 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 MIR513B-201ENST00000385136 84 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 TPMTP2-201ENST00000414372 726 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 AC006946.1-201ENST00000429106 328 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 SKP1P1-201ENST00000438081 489 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 NANOGP10-201ENST00000453325 895 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 AC022695.1-201ENST00000522089 237 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 AC087499.8-201ENST00000578406 226 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 AL137849.1-201ENST00000604767 169 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 AC004853.1-201ENST00000604902 698 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 AL390208.1-201ENST00000605885 644 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 SNORA62.6-201ENST00000606322 83 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 TUG1_1.1-201ENST00000610654 145 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 AC006927.4-201ENST00000639187 543 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 ZNF285B-201ENST00000561698 1767 ntBASIC3.86□□□□□ -1.79
PRPF39Q86UA1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PRPF39Q86UA1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 SOD2P1-201ENST00000396543 562 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 HMGB1P49-201ENST00000418882 569 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 RPL7P30-201ENST00000420888 709 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AC093698.1-201ENST00000423843 571 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AL590103.1-201ENST00000434488 307 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AC098824.1-201ENST00000453565 980 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 BX322784.1-201ENST00000455793 1077 ntBASIC3.85□□□□□ -1.79
PRPF39Q86UA1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms