Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 MTND2P4-201ENST00000445034 1004 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 SLC31A1P1-201ENST00000451221 567 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 RPS27AP8-201ENST00000452665 445 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AC098824.1-201ENST00000453565 980 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AC072039.1-201ENST00000477611 581 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AC092045.1-201ENST00000495716 1231 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 HSPE1P23-201ENST00000509838 286 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AC117532.1-201ENST00000514638 323 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AGGF1P8-201ENST00000562979 1000 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AC040904.1-201ENST00000590850 223 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AL022161.1-201ENST00000604390 213 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AC009237.17-201ENST00000618111 748 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 RNU6-156P-201ENST00000621869 107 ntBASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRT28Q7Z3Y7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 MTND4P34-201ENST00000572715 1371 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 LINC01355-201ENST00000566551 5444 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 RNU6-984P-201ENST00000363236 109 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 RNU6-657P-201ENST00000383904 107 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 SNRPEP2-201ENST00000397592 279 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 LAP3P1-201ENST00000403648 294 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AL021407.1-201ENST00000404531 386 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 MTHFD2P2-201ENST00000407725 247 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AC096632.1-201ENST00000427395 310 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AL035407.1-201ENST00000429211 571 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AL590103.1-201ENST00000434488 307 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AC092427.1-201ENST00000439177 601 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 MTND2P20-201ENST00000440805 661 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 RPS26P56-201ENST00000444468 240 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AC097262.1-201ENST00000452559 548 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 RPL18AP17-201ENST00000455326 198 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 RPL31P3-201ENST00000458430 332 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 MTCYBP17-201ENST00000503579 789 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 STMN1P2-201ENST00000508435 439 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 Vault.1-201ENST00000516474 102 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 LSM6P2-201ENST00000552208 177 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AC074029.1-201ENST00000552531 1044 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 MIR3915-201ENST00000578518 97 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AC018714.1-201ENST00000605028 208 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AC245008.1-201ENST00000608123 476 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AL162274.2-201ENST00000614406 332 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 MIR6864-201ENST00000617935 70 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AC008443.7-201ENST00000622195 246 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AP003355.3-201ENST00000623465 114 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AC231657.1-201ENST00000624313 397 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 ZNF807-201ENST00000328088 1707 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 AL645937.1-201ENST00000641739 1652 ntBASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
KRT28Q7Z3Y7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 MTCO1P14-201ENST00000441695 1559 ntBASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 SNORA80A-201ENST00000363922 136 ntBASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 RNU6-921P-201ENST00000384361 107 ntBASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 MIR649-201ENST00000384843 97 ntBASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 ZNF603P-201ENST00000405613 487 ntBASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 AL450338.1-201ENST00000407987 512 ntBASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 AC073264.1-201ENST00000411508 416 ntBASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 COTL1P1-201ENST00000422309 375 ntBASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 RPS12P5-201ENST00000423449 371 ntBASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 USP9YP36-201ENST00000424581 829 ntBASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRT28Q7Z3Y7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms