Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PTMAP2-201ENST00000397627 327 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 RNA5SP104-201ENST00000410989 118 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 HMGB1P37-201ENST00000439613 609 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC069285.2-201ENST00000440210 275 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 MTND4P18-201ENST00000447010 465 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 NANOGP10-201ENST00000453325 895 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 RPL21P11-201ENST00000461458 483 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC021678.1-201ENST00000505195 936 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC093809.1-201ENST00000509155 340 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 TRMT10BP1-201ENST00000519377 943 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC068587.4-201ENST00000533893 186 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC087883.1-201ENST00000551882 391 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC141257.3-201ENST00000572906 215 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 SEPT7P9-203ENST00000604116 343 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AL355073.2-201ENST00000612106 557 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 DDX18P3-201ENST00000404856 2007 ntBASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3BQ7Z3V4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AC011266.1-201ENST00000624119 3569 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 RNU6-1283P-201ENST00000365314 105 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 RNU5E-5P-201ENST00000365379 116 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 Y_RNA.582-201ENST00000391023 95 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 HMGB1P17-201ENST00000403495 628 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 SNORA3.3-201ENST00000408712 125 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 RNU6-248P-201ENST00000410720 107 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 SNORA57.3-201ENST00000411095 141 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 HMGN1P14-201ENST00000412459 517 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 RAB9AP3-201ENST00000412737 573 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 MTND1P21-201ENST00000412991 285 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 PRELID3BP11-201ENST00000414230 479 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 OFD1P18Y-201ENST00000420889 959 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 MRPS10P2-201ENST00000431226 381 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AL353748.1-201ENST00000440753 474 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 RPL39P6-201ENST00000448289 150 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 RAB9AP1-201ENST00000449393 573 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 ACTR3P3-201ENST00000480448 893 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AC114981.1-201ENST00000503897 678 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AC007991.1-201ENST00000522680 631 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AP002453.2-201ENST00000533503 320 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 SNORD39.3-201ENST00000584451 71 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AC008638.3-201ENST00000603341 463 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AL139395.1-201ENST00000603662 160 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AL513477.2-201ENST00000607858 568 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AC109347.2-201ENST00000610220 349 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AC027807.2-201ENST00000616099 408 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AL158196.1-201ENST00000616786 434 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 U4.5-201ENST00000617137 123 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 ZNF962P-201ENST00000443465 3140 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 AP004289.2-201ENST00000444413 1457 ntBASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.86□□□□□ -1.63
UBE3BQ7Z3V4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 OR4G2P-201ENST00000328113 903 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 RNU6-297P-201ENST00000384636 107 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 MIR670-201ENST00000390142 98 ntBASIC4.85□□□□□ -1.63
UBE3BQ7Z3V4 RNA5SP171-201ENST00000391071 115 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms