Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.21□□□□□ -1.9
USP50Q70EL3 RNA5SP282-201ENST00000516355 108 ntBASIC3.21□□□□□ -1.9
USP50Q70EL3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.21□□□□□ -1.9
USP50Q70EL3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.21□□□□□ -1.9
USP50Q70EL3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.21□□□□□ -1.9
USP50Q70EL3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.21□□□□□ -1.9
USP50Q70EL3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.21□□□□□ -1.9
USP50Q70EL3 ZNF861P-201ENST00000588126 639 ntBASIC3.21□□□□□ -1.9
USP50Q70EL3 AC008277.2-201ENST00000605196 797 ntBASIC3.21□□□□□ -1.9
USP50Q70EL3 MIR4496-201ENST00000635896 61 ntBASIC3.21□□□□□ -1.9
USP50Q70EL3 AP000526.1-201ENST00000603308 1388 ntBASIC3.21□□□□□ -1.9
USP50Q70EL3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.21□□□□□ -1.9
USP50Q70EL3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USP50Q70EL3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.2□□□□□ -1.9
USP50Q70EL3 GTF2H2B-203ENST00000508065 1432 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.2□□□□□ -1.9
USP50Q70EL3 AL355596.1-201ENST00000565399 3996 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 RNA5SP289-201ENST00000362332 137 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP50Q70EL3 SKINT1L-201ENST00000401057 817 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 RPL7P46-201ENST00000425129 740 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.2□□□□□ -1.9
USP50Q70EL3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
USP50Q70EL3 AC104308.1-201ENST00000454621 333 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 RPS4XP6-201ENST00000477670 797 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 AC126121.1-201ENST00000482313 553 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.2□□□□□ -1.9
USP50Q70EL3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.2□□□□□ -1.9
USP50Q70EL3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.2□□□□□ -1.9
USP50Q70EL3 MTCO2P32-201ENST00000514865 403 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 RNU6-991P-201ENST00000516168 107 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP50Q70EL3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.2□□□□□ -1.9
USP50Q70EL3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.2□□□□□ -1.9
USP50Q70EL3 YWHAQP7-201ENST00000603536 658 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 MIR6864-201ENST00000617935 70 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 AC119674.1-220ENST00000641502 1048 ntBASIC3.2□□□□□ -1.9
USP50Q70EL3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.2□□□□□ -1.9
USP50Q70EL3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP50Q70EL3 MIR26A1-201ENST00000362205 77 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 U3.11-201ENST00000364476 212 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 RNU6-805P-201ENST00000365643 106 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 RNU6-152P-201ENST00000384037 107 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 RN7SKP58-201ENST00000411010 305 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 RNA5SP107-201ENST00000411358 122 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 RPS7P13-201ENST00000413955 498 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 AL139415.2-201ENST00000431968 163 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 AL591806.2-201ENST00000433122 173 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 RAD1P2-201ENST00000446414 663 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP50Q70EL3 RPL7P52-201ENST00000449200 742 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 AL590639.1-201ENST00000456484 337 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 HMGN2P13-201ENST00000476476 274 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.19□□□□□ -1.9
USP50Q70EL3 AC090525.1-201ENST00000479116 478 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 AC108210.2-201ENST00000503681 201 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 SNORA31.26-201ENST00000517250 137 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.19□□□□□ -1.9
USP50Q70EL3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.19□□□□□ -1.9
USP50Q70EL3 EIF1AXP2-201ENST00000555940 413 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 AC009063.1-201ENST00000563342 702 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.19□□□□□ -1.9
USP50Q70EL3 AC007621.1-201ENST00000604544 437 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 AC009159.1-201ENST00000618386 642 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 U6.48-201ENST00000618523 106 ntBASIC3.19□□□□□ -1.9
USP50Q70EL3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP50Q70EL3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.19□□□□□ -1.9
USP50Q70EL3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.19□□□□□ -1.9
USP50Q70EL3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
USP50Q70EL3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.19□□□□□ -1.9
USP50Q70EL3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP50Q70EL3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP50Q70EL3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP50Q70EL3 RNU1-35P-201ENST00000362782 153 ntBASIC3.18□□□□□ -1.9
USP50Q70EL3 MIR7-1-201ENST00000384871 110 ntBASIC3.18□□□□□ -1.9
USP50Q70EL3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.18□□□□□ -1.9
USP50Q70EL3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.18□□□□□ -1.9
USP50Q70EL3 CKS1BP5-201ENST00000434172 273 ntBASIC3.18□□□□□ -1.9
USP50Q70EL3 AC112220.1-201ENST00000434628 355 ntBASIC3.18□□□□□ -1.9
USP50Q70EL3 SETP8-201ENST00000435341 628 ntBASIC3.18□□□□□ -1.9
USP50Q70EL3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP50Q70EL3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.18□□□□□ -1.9
USP50Q70EL3 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.18□□□□□ -1.9
USP50Q70EL3 RNA5SP385-201ENST00000515947 110 ntBASIC3.18□□□□□ -1.9
USP50Q70EL3 Y_RNA.676-201ENST00000516393 96 ntBASIC3.18□□□□□ -1.9
USP50Q70EL3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP50Q70EL3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.18□□□□□ -1.9
USP50Q70EL3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.18□□□□□ -1.9
USP50Q70EL3 AL391156.1-201ENST00000554965 554 ntBASIC3.18□□□□□ -1.9
USP50Q70EL3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.18□□□□□ -1.9
USP50Q70EL3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.18□□□□□ -1.9
USP50Q70EL3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
USP50Q70EL3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
USP50Q70EL3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP50Q70EL3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP50Q70EL3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP50Q70EL3 XPOTP1-201ENST00000443317 2398 ntBASIC3.17□□□□□ -1.9
USP50Q70EL3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP50Q70EL3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms