Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC107918.3-201ENST00000533272 382 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC006960.3-201ENST00000561845 705 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 VN1R79P-201ENST00000593540 513 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC091488.1-201ENST00000604239 660 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC090578.1-201ENST00000604955 591 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AP001521.1-201ENST00000609150 300 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AL359535.1-201ENST00000612100 1087 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC116447.1-201ENST00000613153 453 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC006338.1-201ENST00000618453 749 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC136475.10-201ENST00000620253 385 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 MIR6810-201ENST00000622701 70 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 MTCO1P14-201ENST00000441695 1559 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 AL450326.2-201ENST00000421913 1962 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF549Q6P9A3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 IQCB2P-201ENST00000401788 1633 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 RNA5SP399-201ENST00000364003 117 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 RNU6-115P-201ENST00000364310 107 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 RNU6-1122P-201ENST00000384449 107 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 ENSAP1-201ENST00000392855 326 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC025750.1-201ENST00000399891 379 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 RPS26P47-201ENST00000427219 348 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 RPL37P21-201ENST00000435890 276 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC092013.1-201ENST00000438795 332 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 MTCO3P18-201ENST00000440206 761 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 NFU1P2-201ENST00000448700 469 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 MTND2P24-201ENST00000453434 806 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 FGF7P3-201ENST00000454645 303 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 SNRPFP4-201ENST00000456366 242 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AL672167.3-201ENST00000465951 960 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC092989.1-201ENST00000481235 277 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC108078.1-201ENST00000508073 725 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 RNU6-430P-201ENST00000517078 107 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AF186190.1-201ENST00000517470 480 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 MRPL49P2-201ENST00000521066 465 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC006504.3-201ENST00000586818 523 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC010200.2-201ENST00000605098 235 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC091965.4-201ENST00000607691 587 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC104458.1-201ENST00000608243 463 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 MIR6758-201ENST00000620653 63 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC099654.10-201ENST00000640395 161 ntBASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.95□□□□□ -1.78
ZNF549Q6P9A3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 PHKBP1-201ENST00000450951 1951 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 AC009229.4-201ENST00000623854 1947 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 Y_RNA.70-201ENST00000362886 110 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 SNORA72.1-201ENST00000363485 129 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 RNU6-657P-201ENST00000383904 107 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 RNU6-114P-201ENST00000384704 105 ntBASIC3.94□□□□□ -1.78
ZNF549Q6P9A3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms