Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RPS20P5-201ENST00000434808 360 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 AL161722.1-201ENST00000446972 1032 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 PCNPP5-201ENST00000452246 481 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 RPL21P71-201ENST00000465598 459 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 RN7SL738P-201ENST00000470264 297 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC104563.1-201ENST00000476147 376 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AL161747.1-201ENST00000480068 358 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 TRBVA-201ENST00000498804 316 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC103843.2-201ENST00000530523 682 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 OR4K8P-201ENST00000578842 1048 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC113195.1-201ENST00000579952 141 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 BNIP3P16-201ENST00000589779 534 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC006157.1-201ENST00000611750 366 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC107871.2-201ENST00000612894 502 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 AC012409.4-201ENST00000612923 249 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 USP9YP4-201ENST00000424401 1745 ntBASIC5.5□□□□□ -1.53
RNF43Q68DV7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF43Q68DV7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF43Q68DV7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF43Q68DV7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF43Q68DV7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF43Q68DV7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC000374.1-201ENST00000434698 1745 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 MTND5P30-201ENST00000452896 1731 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AL442128.2-201ENST00000620246 1824 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF43Q68DV7 RNU6-1252P-201ENST00000363054 104 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 RNY1P14-201ENST00000384426 108 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 SOD2P1-201ENST00000396543 562 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 AL139397.2-201ENST00000404529 772 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AL590290.1-201ENST00000405336 380 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 MIR548M-201ENST00000408260 86 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 U3.36-201ENST00000408418 213 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 Y_RNA.646-201ENST00000410980 101 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AF228730.2-201ENST00000438784 848 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 AP1S2P1-201ENST00000457344 379 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 RPL23AP71-201ENST00000470966 469 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC092754.1-201ENST00000472975 479 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC058823.1-201ENST00000485315 474 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 RPS27P27-201ENST00000498779 255 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 Y_RNA.661-201ENST00000516003 99 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 RNU6-1038P-201ENST00000516516 104 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 RNA5SP454-201ENST00000517231 127 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC100784.1-201ENST00000522790 310 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AP000827.1-201ENST00000527814 258 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 AL118558.2-201ENST00000556294 238 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC124068.1-201ENST00000563131 678 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC018462.2-201ENST00000605375 395 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 AP000346.3-201ENST00000622821 210 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 AC074101.1-201ENST00000637861 241 ntBASIC5.49□□□□□ -1.53
RNF43Q68DV7 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF43Q68DV7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF43Q68DV7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF43Q68DV7 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF43Q68DV7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF43Q68DV7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF43Q68DV7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF43Q68DV7 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.48□□□□□ -1.53
RNF43Q68DV7 PANDAR-201ENST00000629595 1506 ntBASIC5.48□□□□□ -1.53
RNF43Q68DV7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RNF43Q68DV7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RNF43Q68DV7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF43Q68DV7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RNF43Q68DV7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms