Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
NUP188Q5SRE5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
NUP188Q5SRE5 RPL36AP6-201ENST00000435770 321 ntBASIC2.96□□□□□ -1.93
NUP188Q5SRE5 RPL7P54-201ENST00000438336 674 ntBASIC2.96□□□□□ -1.93
NUP188Q5SRE5 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.96□□□□□ -1.93
NUP188Q5SRE5 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.96□□□□□ -1.93
NUP188Q5SRE5 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.93
NUP188Q5SRE5 Y_RNA.670-201ENST00000516255 105 ntBASIC2.96□□□□□ -1.93
NUP188Q5SRE5 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.96□□□□□ -1.93
NUP188Q5SRE5 MTCYBP20-201ENST00000524239 1129 ntBASIC2.96□□□□□ -1.93
NUP188Q5SRE5 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.96□□□□□ -1.93
NUP188Q5SRE5 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.96□□□□□ -1.93
NUP188Q5SRE5 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.96□□□□□ -1.93
NUP188Q5SRE5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NUP188Q5SRE5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.96□□□□□ -1.94
NUP188Q5SRE5 HMGB1P11-201ENST00000413899 637 ntBASIC2.96□□□□□ -1.94
NUP188Q5SRE5 AL034379.1-201ENST00000423216 253 ntBASIC2.96□□□□□ -1.94
NUP188Q5SRE5 AL035551.1-201ENST00000446931 348 ntBASIC2.96□□□□□ -1.94
NUP188Q5SRE5 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.96□□□□□ -1.94
NUP188Q5SRE5 HSPE1P18-201ENST00000517602 280 ntBASIC2.96□□□□□ -1.94
NUP188Q5SRE5 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
NUP188Q5SRE5 AC002076.2-201ENST00000617362 122 ntBASIC2.96□□□□□ -1.94
NUP188Q5SRE5 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.96□□□□□ -1.94
NUP188Q5SRE5 MFSD8-245ENST00000641743 948 ntBASIC2.96□□□□□ -1.94
NUP188Q5SRE5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NUP188Q5SRE5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.95□□□□□ -1.94
NUP188Q5SRE5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NUP188Q5SRE5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NUP188Q5SRE5 SNORA26.9-201ENST00000391322 122 ntBASIC2.95□□□□□ -1.94
NUP188Q5SRE5 CYCSP49-201ENST00000420810 319 ntBASIC2.95□□□□□ -1.94
NUP188Q5SRE5 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.95□□□□□ -1.94
NUP188Q5SRE5 CACYBPP1-201ENST00000438592 684 ntBASIC2.95□□□□□ -1.94
NUP188Q5SRE5 ELOCP13-201ENST00000443934 329 ntBASIC2.95□□□□□ -1.94
NUP188Q5SRE5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.95□□□□□ -1.94
NUP188Q5SRE5 AC072039.1-201ENST00000477611 581 ntBASIC2.95□□□□□ -1.94
NUP188Q5SRE5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.95□□□□□ -1.94
NUP188Q5SRE5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.95□□□□□ -1.94
NUP188Q5SRE5 MTCO3P13-201ENST00000577757 781 ntBASIC2.95□□□□□ -1.94
NUP188Q5SRE5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.95□□□□□ -1.94
NUP188Q5SRE5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.95□□□□□ -1.94
NUP188Q5SRE5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.95□□□□□ -1.94
NUP188Q5SRE5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
NUP188Q5SRE5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.94□□□□□ -1.94
NUP188Q5SRE5 RNY1P10-201ENST00000363268 113 ntBASIC2.94□□□□□ -1.94
NUP188Q5SRE5 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NUP188Q5SRE5 MTATP6P11-201ENST00000428071 670 ntBASIC2.94□□□□□ -1.94
NUP188Q5SRE5 MUPP-201ENST00000438111 566 ntBASIC2.94□□□□□ -1.94
NUP188Q5SRE5 TAF9P1-201ENST00000445421 515 ntBASIC2.94□□□□□ -1.94
NUP188Q5SRE5 TAF9P2-201ENST00000454958 515 ntBASIC2.94□□□□□ -1.94
NUP188Q5SRE5 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.94□□□□□ -1.94
NUP188Q5SRE5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.94□□□□□ -1.94
NUP188Q5SRE5 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.94□□□□□ -1.94
NUP188Q5SRE5 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.94□□□□□ -1.94
NUP188Q5SRE5 AC006116.7-201ENST00000590141 756 ntBASIC2.94□□□□□ -1.94
NUP188Q5SRE5 TPMTP1-201ENST00000592307 737 ntBASIC2.94□□□□□ -1.94
NUP188Q5SRE5 AP004372.1-201ENST00000604842 844 ntBASIC2.94□□□□□ -1.94
NUP188Q5SRE5 AC067747.1-201ENST00000608026 250 ntBASIC2.94□□□□□ -1.94
NUP188Q5SRE5 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.94□□□□□ -1.94
NUP188Q5SRE5 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.94□□□□□ -1.94
NUP188Q5SRE5 AC009501.3-201ENST00000605001 1352 ntBASIC2.94□□□□□ -1.94
NUP188Q5SRE5 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NUP188Q5SRE5 BX005019.1-201ENST00000561881 1810 ntBASIC2.94□□□□□ -1.94
NUP188Q5SRE5 AC092326.2-201ENST00000624772 1561 ntBASIC2.94□□□□□ -1.94
NUP188Q5SRE5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
NUP188Q5SRE5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.94□□□□□ -1.94
NUP188Q5SRE5 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 CFTRP1-201ENST00000456646 183 ntBASIC2.93□□□□□ -1.94
NUP188Q5SRE5 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 AC025260.1-201ENST00000548858 430 ntBASIC2.93□□□□□ -1.94
NUP188Q5SRE5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 MIR499A-201ENST00000384903 122 ntBASIC2.93□□□□□ -1.94
NUP188Q5SRE5 AL591416.1-201ENST00000404015 867 ntBASIC2.93□□□□□ -1.94
NUP188Q5SRE5 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 RPS26P30-201ENST00000443431 335 ntBASIC2.93□□□□□ -1.94
NUP188Q5SRE5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 AL645944.1-201ENST00000603857 493 ntBASIC2.93□□□□□ -1.94
NUP188Q5SRE5 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.93□□□□□ -1.94
NUP188Q5SRE5 AL110115.1-201ENST00000614396 364 ntBASIC2.93□□□□□ -1.94
NUP188Q5SRE5 AL160394.1-201ENST00000624765 724 ntBASIC2.93□□□□□ -1.94
NUP188Q5SRE5 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.92□□□□□ -1.94
NUP188Q5SRE5 LUZP4P1-201ENST00000415420 344 ntBASIC2.92□□□□□ -1.94
NUP188Q5SRE5 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.92□□□□□ -1.94
NUP188Q5SRE5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.92□□□□□ -1.94
NUP188Q5SRE5 RPS24P8-201ENST00000431490 402 ntBASIC2.92□□□□□ -1.94
NUP188Q5SRE5 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC2.92□□□□□ -1.94
NUP188Q5SRE5 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
NUP188Q5SRE5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.92□□□□□ -1.94
NUP188Q5SRE5 MIR5007-201ENST00000583098 95 ntBASIC2.92□□□□□ -1.94
NUP188Q5SRE5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
NUP188Q5SRE5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NUP188Q5SRE5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms