Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RNU6-11P-201ENST00000364234 107 ntBASIC1.92□□□□□ -2.1
LRRK2Q5S007 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.92□□□□□ -2.1
LRRK2Q5S007 RPS7P9-201ENST00000414704 586 ntBASIC1.92□□□□□ -2.1
LRRK2Q5S007 AP1B1P2-201ENST00000416196 106 ntBASIC1.92□□□□□ -2.1
LRRK2Q5S007 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.92□□□□□ -2.1
LRRK2Q5S007 RPS4XP11-201ENST00000446897 772 ntBASIC1.92□□□□□ -2.1
LRRK2Q5S007 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.92□□□□□ -2.1
LRRK2Q5S007 AC123904.3-201ENST00000547218 814 ntBASIC1.92□□□□□ -2.1
LRRK2Q5S007 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.92□□□□□ -2.1
LRRK2Q5S007 MIR6766-201ENST00000622641 72 ntBASIC1.92□□□□□ -2.1
LRRK2Q5S007 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRRK2Q5S007 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRRK2Q5S007 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LRRK2Q5S007 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRRK2Q5S007 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRRK2Q5S007 Y_RNA.30-201ENST00000362572 97 ntBASIC1.92□□□□□ -2.1
LRRK2Q5S007 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRRK2Q5S007 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.92□□□□□ -2.1
LRRK2Q5S007 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.92□□□□□ -2.1
LRRK2Q5S007 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.92□□□□□ -2.1
LRRK2Q5S007 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.92□□□□□ -2.1
LRRK2Q5S007 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC1.92□□□□□ -2.1
LRRK2Q5S007 FRG1DP-201ENST00000635586 771 ntBASIC1.92□□□□□ -2.1
LRRK2Q5S007 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.92□□□□□ -2.1
LRRK2Q5S007 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
LRRK2Q5S007 CDC27P2-201ENST00000425026 1922 ntBASIC1.92□□□□□ -2.1
LRRK2Q5S007 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LRRK2Q5S007 RNA5SP456-201ENST00000364002 114 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 AC019129.1-201ENST00000403786 261 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 AL023807.1-201ENST00000407932 359 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 AL139156.1-201ENST00000412785 841 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 AC073136.2-201ENST00000417282 849 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.91□□□□□ -2.1
LRRK2Q5S007 RPS24P8-201ENST00000431490 402 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC1.91□□□□□ -2.1
LRRK2Q5S007 AC093767.1-201ENST00000504523 156 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC1.91□□□□□ -2.1
LRRK2Q5S007 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.91□□□□□ -2.1
LRRK2Q5S007 AC005951.1-201ENST00000576706 485 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 RMST_2.1-201ENST00000617263 136 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 AC010872.1-201ENST00000624225 675 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LRRK2Q5S007 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LRRK2Q5S007 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
LRRK2Q5S007 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
LRRK2Q5S007 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LRRK2Q5S007 RHEBP3-201ENST00000411920 351 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 HMGB3P23-201ENST00000414981 585 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 AC105402.2-201ENST00000438503 358 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 AC011037.1-201ENST00000483964 558 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.91□□□□□ -2.1
LRRK2Q5S007 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.91□□□□□ -2.1
LRRK2Q5S007 LRRC37A5P-203ENST00000580181 585 ntBASIC1.91□□□□□ -2.1
LRRK2Q5S007 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.91□□□□□ -2.1
LRRK2Q5S007 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
LRRK2Q5S007 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LRRK2Q5S007 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LRRK2Q5S007 RNU6-356P-201ENST00000384140 107 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U8.10-201ENST00000384260 133 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 RNA5SP210-201ENST00000391034 120 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 RNU2-2P-201ENST00000410396 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.9□□□□□ -2.1
LRRK2Q5S007 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.9□□□□□ -2.1
LRRK2Q5S007 AC125238.1-201ENST00000448842 249 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 SNRPFP4-201ENST00000456366 242 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U2.15-201ENST00000611544 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U2.16-201ENST00000613119 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U2.12-201ENST00000613778 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U2.20-201ENST00000613956 192 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U2.9-201ENST00000615427 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U2.11-201ENST00000616345 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U2.2-201ENST00000616535 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 AC108479.2-201ENST00000617314 601 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U2.3-201ENST00000617785 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U2.19-201ENST00000618602 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 RNU2-1-201ENST00000618664 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U2.6-201ENST00000619225 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U2.5-201ENST00000619465 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 U2.10-201ENST00000620268 191 ntBASIC1.9□□□□□ -2.1
LRRK2Q5S007 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.9□□□□□ -2.1
LRRK2Q5S007 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
LRRK2Q5S007 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
LRRK2Q5S007 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
LRRK2Q5S007 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.9□□□□□ -2.11
LRRK2Q5S007 TPMTP3-201ENST00000411928 735 ntBASIC1.9□□□□□ -2.11
LRRK2Q5S007 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LRRK2Q5S007 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.9□□□□□ -2.11
LRRK2Q5S007 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.9□□□□□ -2.11
LRRK2Q5S007 AC021146.5-201ENST00000503544 545 ntBASIC1.9□□□□□ -2.11
LRRK2Q5S007 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.9□□□□□ -2.11
LRRK2Q5S007 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.9□□□□□ -2.11
LRRK2Q5S007 BX248123.2-201ENST00000606318 124 ntBASIC1.9□□□□□ -2.11
LRRK2Q5S007 AC103710.1-201ENST00000610003 901 ntBASIC1.9□□□□□ -2.11
LRRK2Q5S007 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.9□□□□□ -2.11
LRRK2Q5S007 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LRRK2Q5S007 MTND5P28-201ENST00000438005 1594 ntBASIC1.9□□□□□ -2.11
LRRK2Q5S007 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
LRRK2Q5S007 AC016717.2-201ENST00000609089 5141 ntBASIC1.9□□□□□ -2.11
LRRK2Q5S007 MIR221-201ENST00000385135 110 ntBASIC1.89□□□□□ -2.11
LRRK2Q5S007 SNORA67.5-201ENST00000391036 107 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms