Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.01□□□□□ -1.93
RAB40BQ12829 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RAB40BQ12829 DBIP2-201ENST00000419076 262 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.01□□□□□ -1.93
RAB40BQ12829 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RAB40BQ12829 OR2AS1P-201ENST00000427827 319 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.01□□□□□ -1.93
RAB40BQ12829 CST9LP2-201ENST00000437612 320 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
RAB40BQ12829 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.01□□□□□ -1.93
RAB40BQ12829 SLC31A1P1-201ENST00000451221 567 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.01□□□□□ -1.93
RAB40BQ12829 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.01□□□□□ -1.93
RAB40BQ12829 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.01□□□□□ -1.93
RAB40BQ12829 SNORD105B-201ENST00000458770 79 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 U3.44-201ENST00000458938 192 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AC026410.2-201ENST00000460281 156 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AL672167.3-201ENST00000465951 960 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 FTH1P2-201ENST00000466086 412 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AC104164.3-201ENST00000467363 1258 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 RN7SL330P-201ENST00000469709 307 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RAB40BQ12829 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.01□□□□□ -1.93
RAB40BQ12829 AC093278.1-201ENST00000494700 600 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.01□□□□□ -1.93
RAB40BQ12829 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.01□□□□□ -1.93
RAB40BQ12829 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.01□□□□□ -1.93
RAB40BQ12829 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.01□□□□□ -1.93
RAB40BQ12829 MTATP6P9-201ENST00000515039 680 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 SNORA70.18-201ENST00000516696 98 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 RNA5SP468-201ENST00000516782 93 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AC104986.1-201ENST00000517978 436 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AC007991.1-201ENST00000522680 631 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 SLC2A13P1-201ENST00000531560 322 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AP000619.3-201ENST00000535634 1127 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.01□□□□□ -1.93
RAB40BQ12829 HIGD1AP17-201ENST00000554576 276 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 MTCYBP23-201ENST00000558717 1102 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.01□□□□□ -1.93
RAB40BQ12829 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.01□□□□□ -1.93
RAB40BQ12829 MIR4637-201ENST00000582405 84 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 MAGOH2P-202ENST00000584384 429 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AC020914.6-201ENST00000594327 272 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.01□□□□□ -1.93
RAB40BQ12829 MIR7851-201ENST00000610611 160 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.01□□□□□ -1.93
RAB40BQ12829 CYCSP41-201ENST00000616920 296 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.01□□□□□ -1.93
RAB40BQ12829 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RAB40BQ12829 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RAB40BQ12829 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RAB40BQ12829 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RAB40BQ12829 ZNF826P-207ENST00000622273 1910 ntBASIC3.01□□□□□ -1.93
RAB40BQ12829 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.01□□□□□ -1.93
RAB40BQ12829 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RAB40BQ12829 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3□□□□□ -1.93
RAB40BQ12829 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RAB40BQ12829 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RAB40BQ12829 CR383658.2-201ENST00000547576 1525 ntBASIC3□□□□□ -1.93
RAB40BQ12829 BCLAF1P1-201ENST00000505813 2752 ntBASIC3□□□□□ -1.93
RAB40BQ12829 NACA3P-201ENST00000359690 648 ntBASIC3□□□□□ -1.93
RAB40BQ12829 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RAB40BQ12829 RNU6-925P-201ENST00000384629 104 ntBASIC3□□□□□ -1.93
RAB40BQ12829 AL049610.1-201ENST00000423374 372 ntBASIC3□□□□□ -1.93
RAB40BQ12829 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3□□□□□ -1.93
RAB40BQ12829 DUTP6-201ENST00000425573 462 ntBASIC3□□□□□ -1.93
RAB40BQ12829 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3□□□□□ -1.93
RAB40BQ12829 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3□□□□□ -1.93
RAB40BQ12829 SETP5-201ENST00000437270 562 ntBASIC3□□□□□ -1.93
RAB40BQ12829 Z95327.1-201ENST00000446082 482 ntBASIC3□□□□□ -1.93
RAB40BQ12829 AC115115.1-201ENST00000449927 248 ntBASIC3□□□□□ -1.93
RAB40BQ12829 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3□□□□□ -1.93
RAB40BQ12829 ST13P14-201ENST00000474095 734 ntBASIC3□□□□□ -1.93
RAB40BQ12829 UBE2Q2P9-201ENST00000490086 202 ntBASIC3□□□□□ -1.93
RAB40BQ12829 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3□□□□□ -1.93
RAB40BQ12829 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3□□□□□ -1.93
RAB40BQ12829 MLLT10P2-201ENST00000506434 249 ntBASIC3□□□□□ -1.93
RAB40BQ12829 NPM1P41-201ENST00000512920 831 ntBASIC3□□□□□ -1.93
RAB40BQ12829 MTND4LP31-201ENST00000514859 294 ntBASIC3□□□□□ -1.93
RAB40BQ12829 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3□□□□□ -1.93
RAB40BQ12829 OR10V3P-201ENST00000525712 725 ntBASIC3□□□□□ -1.93
RAB40BQ12829 HIGD1AP10-201ENST00000527837 282 ntBASIC3□□□□□ -1.93
RAB40BQ12829 AC005832.3-201ENST00000537929 631 ntBASIC3□□□□□ -1.93
RAB40BQ12829 AC024224.1-201ENST00000538284 609 ntBASIC3□□□□□ -1.93
RAB40BQ12829 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3□□□□□ -1.93
RAB40BQ12829 AC018630.1-201ENST00000541376 925 ntBASIC3□□□□□ -1.93
RAB40BQ12829 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3□□□□□ -1.93
RAB40BQ12829 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3□□□□□ -1.93
RAB40BQ12829 TRAV37-201ENST00000553906 342 ntBASIC3□□□□□ -1.93
RAB40BQ12829 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3□□□□□ -1.93
RAB40BQ12829 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3□□□□□ -1.93
RAB40BQ12829 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3□□□□□ -1.93
RAB40BQ12829 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3□□□□□ -1.93
RAB40BQ12829 MIR5685-201ENST00000579080 79 ntBASIC3□□□□□ -1.93
RAB40BQ12829 AC015688.2-201ENST00000584523 262 ntBASIC3□□□□□ -1.93
RAB40BQ12829 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3□□□□□ -1.93
RAB40BQ12829 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3□□□□□ -1.93
RAB40BQ12829 AC015967.1-201ENST00000619893 476 ntBASIC3□□□□□ -1.93
RAB40BQ12829 AC022509.4-201ENST00000621404 572 ntBASIC3□□□□□ -1.93
RAB40BQ12829 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms