Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL024509.2-201ENST00000493462 493 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS1Q01581 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC087894.1-201ENST00000538359 518 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 MIR3908-201ENST00000579798 126 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 BNIP3P22-201ENST00000593399 556 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 RPAP2P1-201ENST00000603626 1168 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC002487.1-201ENST00000604565 994 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 YPEL5P2-201ENST00000605553 359 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC107294.3-201ENST00000609211 526 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS1Q01581 VN1R74P-201ENST00000613259 503 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC007275.1-201ENST00000621243 671 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS1Q01581 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS1Q01581 MTND5P27-201ENST00000428871 1720 ntBASIC2.93□□□□□ -1.94
HMGCS1Q01581 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS1Q01581 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS1Q01581 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HMGCS1Q01581 AC073346.2-201ENST00000624724 2058 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HMGCS1Q01581 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 RNU6-444P-201ENST00000383988 108 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 RNU6-549P-201ENST00000384433 107 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 RNA5SP129-201ENST00000410276 118 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 RNA5SP274-201ENST00000410484 108 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 AL353678.1-201ENST00000422735 741 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 RPS24P6-201ENST00000452670 400 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 RN7SL633P-201ENST00000488974 297 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 RN7SKP43-201ENST00000516173 320 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 IGKV2D-36-201ENST00000518643 226 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 AC005014.3-201ENST00000605985 190 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 AC124016.2-201ENST00000610058 665 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 VN1R7P-201ENST00000619242 903 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 AC007318.2-201ENST00000620999 243 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 AL138960.2-201ENST00000625145 535 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 AC126544.2-201ENST00000625174 749 ntBASIC2.92□□□□□ -1.94
HMGCS1Q01581 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGCS1Q01581 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HMGCS1Q01581 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.91□□□□□ -1.94
HMGCS1Q01581 AC111188.2-201ENST00000529697 1387 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 RNA5SP387-201ENST00000364226 106 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HMGCS1Q01581 DEFB109C-201ENST00000382575 264 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 DEFB109B-201ENST00000382656 264 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 RNU6-441P-201ENST00000384545 106 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 RPL7P25-201ENST00000404151 721 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 AC027644.1-201ENST00000419595 298 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.91□□□□□ -1.94
HMGCS1Q01581 RPL7P46-201ENST00000425129 740 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 AC092634.2-201ENST00000428146 1010 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCS1Q01581 ARF4P4-201ENST00000439608 520 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 TRIM60P18-201ENST00000441518 828 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 AL592437.1-201ENST00000443781 492 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 NPM1P13-201ENST00000452663 865 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 snoU13.24-201ENST00000458998 104 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 RPL21P41-201ENST00000459863 264 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 RN7SL504P-201ENST00000494496 287 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCS1Q01581 CAB39P1-201ENST00000502277 460 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HMGCS1Q01581 AC118282.2-201ENST00000508739 374 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.91□□□□□ -1.94
HMGCS1Q01581 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCS1Q01581 AP003102.1-201ENST00000525638 661 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCS1Q01581 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCS1Q01581 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCS1Q01581 AC012182.1-201ENST00000570133 895 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 MIR5004-201ENST00000579078 107 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 AC126365.2-201ENST00000580630 379 ntBASIC2.91□□□□□ -1.94
HMGCS1Q01581 MIR5195-201ENST00000583555 115 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms