Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CX3CL1P78423 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CX3CL1P78423 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CX3CL1P78423 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CX3CL1P78423 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CX3CL1P78423 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CX3CL1P78423 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CX3CL1P78423 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.37□□□□□ -1.87
CX3CL1P78423 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CX3CL1P78423 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CX3CL1P78423 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CX3CL1P78423 AP002001.2-201ENST00000529025 1469 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CX3CL1P78423 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CX3CL1P78423 FRG1BP-201ENST00000278882 761 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 SNORA7.2-201ENST00000364446 145 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 SNORA56-201ENST00000383966 129 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.36□□□□□ -1.87
CX3CL1P78423 MTCO3P12-201ENST00000416718 547 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 RPL18P10-201ENST00000425606 538 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.36□□□□□ -1.87
CX3CL1P78423 AC112653.1-201ENST00000443851 386 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.36□□□□□ -1.87
CX3CL1P78423 AC010655.1-201ENST00000449336 292 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 SNRPGP9-201ENST00000456025 225 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 AC068724.1-201ENST00000487100 792 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 RN7SL691P-201ENST00000494487 301 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 AL139099.1-201ENST00000497398 403 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.36□□□□□ -1.87
CX3CL1P78423 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.36□□□□□ -1.87
CX3CL1P78423 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.36□□□□□ -1.87
CX3CL1P78423 AC008958.1-201ENST00000511047 682 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 KCTD9P2-201ENST00000512203 1013 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 AF131216.2-201ENST00000512316 564 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 Y_RNA.695-201ENST00000516715 107 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.36□□□□□ -1.87
CX3CL1P78423 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.36□□□□□ -1.87
CX3CL1P78423 AC018630.1-201ENST00000541376 925 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.36□□□□□ -1.87
CX3CL1P78423 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.36□□□□□ -1.87
CX3CL1P78423 AC009101.1-201ENST00000568135 242 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.36□□□□□ -1.87
CX3CL1P78423 MIR5697-201ENST00000578045 78 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 OR4K8P-201ENST00000578842 1048 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.36□□□□□ -1.87
CX3CL1P78423 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CX3CL1P78423 AC027807.2-201ENST00000616099 408 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 AC104010.1-201ENST00000616889 150 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.36□□□□□ -1.87
CX3CL1P78423 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.36□□□□□ -1.87
CX3CL1P78423 FAM35DP-201ENST00000323387 2712 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 AL365440.1-201ENST00000436135 2167 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.36□□□□□ -1.87
CX3CL1P78423 MTND4P4-201ENST00000439033 1366 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.36□□□□□ -1.87
CX3CL1P78423 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CX3CL1P78423 AC021755.1-201ENST00000559747 1447 ntBASIC3.36□□□□□ -1.87
CX3CL1P78423 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CX3CL1P78423 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.35□□□□□ -1.87
CX3CL1P78423 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CL1P78423 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CL1P78423 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CX3CL1P78423 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 AC092125.1-201ENST00000562568 1995 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CL1P78423 RNA5SP322-201ENST00000363617 119 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 RNA5SP366-201ENST00000365454 123 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 RNU1-89P-201ENST00000384592 164 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 RNU6-114P-201ENST00000384704 105 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 MIR135A2-201ENST00000384854 100 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CX3CL1P78423 U3.20-201ENST00000390909 217 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AL049693.1-201ENST00000402760 611 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 RNU4-25P-201ENST00000410569 230 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 RN7SKP142-201ENST00000411236 328 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AL359704.1-201ENST00000411586 781 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CL1P78423 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 CYP4F29P-201ENST00000420685 446 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AC079780.1-201ENST00000428259 207 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CL1P78423 RPL23AP89-201ENST00000439324 255 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CL1P78423 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.35□□□□□ -1.87
CX3CL1P78423 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CX3CL1P78423 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 BNIP3P41-201ENST00000503774 571 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AC025554.1-201ENST00000505641 188 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 AC091965.2-201ENST00000512324 613 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 MIR2114-201ENST00000516645 80 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 IGHV3-32-201ENST00000519182 355 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 MTND4LP18-201ENST00000526864 291 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 MED28P5-201ENST00000528254 438 ntBASIC3.35□□□□□ -1.87
CX3CL1P78423 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.35□□□□□ -1.87
CX3CL1P78423 AC135001.1-201ENST00000544546 283 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms