Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.58□□□□□ -2
ACTBP60709 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.58□□□□□ -2
ACTBP60709 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.58□□□□□ -2
ACTBP60709 AC092798.1-201ENST00000458542 409 ntBASIC2.58□□□□□ -2
ACTBP60709 RPL21P41-201ENST00000459863 264 ntBASIC2.58□□□□□ -2
ACTBP60709 RPS4XP10-201ENST00000465034 731 ntBASIC2.58□□□□□ -2
ACTBP60709 RPS29P2-201ENST00000479278 136 ntBASIC2.58□□□□□ -2
ACTBP60709 AC103975.1-201ENST00000482506 483 ntBASIC2.58□□□□□ -2
ACTBP60709 AP001025.2-201ENST00000490908 477 ntBASIC2.58□□□□□ -2
ACTBP60709 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.58□□□□□ -2
ACTBP60709 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.58□□□□□ -2
ACTBP60709 MLLT10P2-201ENST00000506434 249 ntBASIC2.58□□□□□ -2
ACTBP60709 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.58□□□□□ -2
ACTBP60709 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.58□□□□□ -2
ACTBP60709 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.58□□□□□ -2
ACTBP60709 RNA5SP76-201ENST00000516277 87 ntBASIC2.58□□□□□ -2
ACTBP60709 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.58□□□□□ -2
ACTBP60709 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.58□□□□□ -2
ACTBP60709 OR4A45P-201ENST00000529954 901 ntBASIC2.58□□□□□ -2
ACTBP60709 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.58□□□□□ -2
ACTBP60709 SNRPGP16-201ENST00000533275 226 ntBASIC2.58□□□□□ -2
ACTBP60709 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.58□□□□□ -2
ACTBP60709 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.58□□□□□ -2
ACTBP60709 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.58□□□□□ -2
ACTBP60709 AC034105.3-201ENST00000565294 442 ntBASIC2.58□□□□□ -2
ACTBP60709 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.58□□□□□ -2
ACTBP60709 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.58□□□□□ -2
ACTBP60709 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.58□□□□□ -2
ACTBP60709 AC008687.2-201ENST00000597865 520 ntBASIC2.58□□□□□ -2
ACTBP60709 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.58□□□□□ -2
ACTBP60709 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.58□□□□□ -2
ACTBP60709 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.58□□□□□ -2
ACTBP60709 AC083865.1-201ENST00000636634 831 ntBASIC2.58□□□□□ -2
ACTBP60709 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.58□□□□□ -2
ACTBP60709 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.58□□□□□ -2
ACTBP60709 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.57□□□□□ -2
ACTBP60709 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.57□□□□□ -2
ACTBP60709 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.57□□□□□ -2
ACTBP60709 NACA3P-201ENST00000359690 648 ntBASIC2.57□□□□□ -2
ACTBP60709 RNU6-252P-201ENST00000363232 107 ntBASIC2.57□□□□□ -2
ACTBP60709 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
ACTBP60709 SNORD15B-201ENST00000384714 146 ntBASIC2.57□□□□□ -2
ACTBP60709 MIR181B1-201ENST00000385240 110 ntBASIC2.57□□□□□ -2
ACTBP60709 TAF9BP2-201ENST00000400856 499 ntBASIC2.57□□□□□ -2
ACTBP60709 SNORA11.1-201ENST00000408133 129 ntBASIC2.57□□□□□ -2
ACTBP60709 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.57□□□□□ -2
ACTBP60709 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.57□□□□□ -2
ACTBP60709 FABP5P3-201ENST00000437960 408 ntBASIC2.57□□□□□ -2
ACTBP60709 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.57□□□□□ -2
ACTBP60709 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.57□□□□□ -2
ACTBP60709 AC004865.1-201ENST00000442276 1003 ntBASIC2.57□□□□□ -2
ACTBP60709 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.57□□□□□ -2
ACTBP60709 MTND3P24-201ENST00000506306 329 ntBASIC2.57□□□□□ -2
ACTBP60709 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.57□□□□□ -2
ACTBP60709 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.57□□□□□ -2
ACTBP60709 OR5G4P-201ENST00000525251 760 ntBASIC2.57□□□□□ -2
ACTBP60709 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.57□□□□□ -2
ACTBP60709 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.57□□□□□ -2
ACTBP60709 RPL21P12-201ENST00000559810 515 ntBASIC2.57□□□□□ -2
ACTBP60709 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.57□□□□□ -2
ACTBP60709 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ACTBP60709 ZNF415P1-201ENST00000582279 1166 ntBASIC2.57□□□□□ -2
ACTBP60709 AC005242.1-201ENST00000585658 438 ntBASIC2.57□□□□□ -2
ACTBP60709 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.57□□□□□ -2
ACTBP60709 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.57□□□□□ -2
ACTBP60709 RPL12P50-201ENST00000603116 116 ntBASIC2.57□□□□□ -2
ACTBP60709 AP001330.4-201ENST00000604350 154 ntBASIC2.57□□□□□ -2
ACTBP60709 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.57□□□□□ -2
ACTBP60709 AL020991.1-201ENST00000612314 373 ntBASIC2.57□□□□□ -2
ACTBP60709 AC105227.2-201ENST00000615075 605 ntBASIC2.57□□□□□ -2
ACTBP60709 AC140725.3-201ENST00000616193 880 ntBASIC2.57□□□□□ -2
ACTBP60709 STMN1P1-201ENST00000617809 440 ntBASIC2.57□□□□□ -2
ACTBP60709 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.57□□□□□ -2
ACTBP60709 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
ACTBP60709 AC024341.1-201ENST00000526444 1552 ntBASIC2.57□□□□□ -2
ACTBP60709 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ACTBP60709 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ACTBP60709 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
ACTBP60709 RPL9P7-201ENST00000330965 580 ntBASIC2.56□□□□□ -2
ACTBP60709 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.56□□□□□ -2
ACTBP60709 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.56□□□□□ -2
ACTBP60709 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.56□□□□□ -2
ACTBP60709 RNA5SP387-201ENST00000364226 106 ntBASIC2.56□□□□□ -2
ACTBP60709 RNVU1-3-201ENST00000364313 161 ntBASIC2.56□□□□□ -2
ACTBP60709 SNORA70.4-201ENST00000365509 134 ntBASIC2.56□□□□□ -2
ACTBP60709 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.56□□□□□ -2
ACTBP60709 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.56□□□□□ -2
ACTBP60709 MIR34B-201ENST00000385076 84 ntBASIC2.56□□□□□ -2
ACTBP60709 RNA5SP252-201ENST00000391131 119 ntBASIC2.56□□□□□ -2
ACTBP60709 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.56□□□□□ -2
ACTBP60709 AC006028.1-201ENST00000438379 402 ntBASIC2.56□□□□□ -2
ACTBP60709 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.56□□□□□ -2
ACTBP60709 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.56□□□□□ -2
ACTBP60709 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.56□□□□□ -2
ACTBP60709 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.56□□□□□ -2
ACTBP60709 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.56□□□□□ -2
ACTBP60709 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.56□□□□□ -2
ACTBP60709 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.56□□□□□ -2
ACTBP60709 MTCO3P44-201ENST00000510977 541 ntBASIC2.56□□□□□ -2
ACTBP60709 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms