Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VSX2P58304 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VSX2P58304 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VSX2P58304 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VSX2P58304 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
VSX2P58304 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VSX2P58304 SAGE4P-201ENST00000442271 3381 ntBASIC2.91□□□□□ -1.94
VSX2P58304 MTND5P31-201ENST00000419366 1374 ntBASIC2.91□□□□□ -1.94
VSX2P58304 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VSX2P58304 SNORA51.2-201ENST00000364595 132 ntBASIC2.91□□□□□ -1.94
VSX2P58304 SNORA54-201ENST00000384281 123 ntBASIC2.91□□□□□ -1.94
VSX2P58304 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.91□□□□□ -1.94
VSX2P58304 RN7SKP220-201ENST00000410611 288 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.91□□□□□ -1.94
VSX2P58304 UBE2V1P9-201ENST00000414760 368 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AC022018.1-201ENST00000430685 241 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AC244505.4-201ENST00000434905 287 ntBASIC2.91□□□□□ -1.94
VSX2P58304 SSXP5-201ENST00000443473 287 ntBASIC2.91□□□□□ -1.94
VSX2P58304 HMGB3P6-201ENST00000444896 598 ntBASIC2.91□□□□□ -1.94
VSX2P58304 OR51B8P-201ENST00000449892 769 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.91□□□□□ -1.94
VSX2P58304 SSXP4-201ENST00000451349 245 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.91□□□□□ -1.94
VSX2P58304 RN7SL75P-201ENST00000461926 281 ntBASIC2.91□□□□□ -1.94
VSX2P58304 RPL21P104-201ENST00000464143 478 ntBASIC2.91□□□□□ -1.94
VSX2P58304 S100A11P2-201ENST00000467589 312 ntBASIC2.91□□□□□ -1.94
VSX2P58304 RPL21P18-201ENST00000469899 480 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AC108860.1-201ENST00000484521 383 ntBASIC2.91□□□□□ -1.94
VSX2P58304 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.91□□□□□ -1.94
VSX2P58304 HMGB1P22-201ENST00000505315 124 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AC118282.1-201ENST00000506408 765 ntBASIC2.91□□□□□ -1.94
VSX2P58304 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VSX2P58304 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.91□□□□□ -1.94
VSX2P58304 AC119751.1-201ENST00000513357 765 ntBASIC2.91□□□□□ -1.94
VSX2P58304 RNA5SP385-201ENST00000515947 110 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.91□□□□□ -1.94
VSX2P58304 AP000790.1-201ENST00000528891 737 ntBASIC2.91□□□□□ -1.94
VSX2P58304 MTCYBP41-201ENST00000528913 1123 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AP003168.1-201ENST00000530091 307 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.91□□□□□ -1.94
VSX2P58304 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VSX2P58304 AC022080.3-201ENST00000544433 482 ntBASIC2.91□□□□□ -1.94
VSX2P58304 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.91□□□□□ -1.94
VSX2P58304 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.91□□□□□ -1.94
VSX2P58304 AC106782.4-201ENST00000568264 210 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.91□□□□□ -1.94
VSX2P58304 BNIP3P11-201ENST00000603878 563 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AC025588.3-201ENST00000604182 274 ntBASIC2.91□□□□□ -1.94
VSX2P58304 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.91□□□□□ -1.94
VSX2P58304 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.91□□□□□ -1.94
VSX2P58304 AC093831.2-201ENST00000624393 3427 ntBASIC2.91□□□□□ -1.94
VSX2P58304 AL355578.1-201ENST00000607405 1328 ntBASIC2.91□□□□□ -1.94
VSX2P58304 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
VSX2P58304 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
VSX2P58304 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VSX2P58304 RPL23AP57-201ENST00000332361 466 ntBASIC2.9□□□□□ -1.95
VSX2P58304 RNU6-989P-201ENST00000362756 107 ntBASIC2.9□□□□□ -1.95
VSX2P58304 Y_RNA.111-201ENST00000363248 100 ntBASIC2.9□□□□□ -1.95
VSX2P58304 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
VSX2P58304 U6.112-201ENST00000384129 70 ntBASIC2.9□□□□□ -1.95
VSX2P58304 Y_RNA.493-201ENST00000384422 102 ntBASIC2.9□□□□□ -1.95
VSX2P58304 RNU6-932P-201ENST00000391108 106 ntBASIC2.9□□□□□ -1.95
VSX2P58304 RNU6-575P-201ENST00000411326 105 ntBASIC2.9□□□□□ -1.95
VSX2P58304 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VSX2P58304 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.9□□□□□ -1.95
VSX2P58304 MTCYBP24-201ENST00000420387 1106 ntBASIC2.9□□□□□ -1.95
VSX2P58304 RPL35AP12-201ENST00000425362 338 ntBASIC2.9□□□□□ -1.95
VSX2P58304 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.9□□□□□ -1.95
VSX2P58304 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.9□□□□□ -1.95
VSX2P58304 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.9□□□□□ -1.95
VSX2P58304 RPS12P18-201ENST00000442381 270 ntBASIC2.9□□□□□ -1.95
VSX2P58304 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.9□□□□□ -1.95
VSX2P58304 RSL24D1P3-201ENST00000449255 495 ntBASIC2.9□□□□□ -1.95
VSX2P58304 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.9□□□□□ -1.95
VSX2P58304 SYPL1P1-201ENST00000473622 768 ntBASIC2.9□□□□□ -1.95
VSX2P58304 AC068724.1-201ENST00000487100 792 ntBASIC2.9□□□□□ -1.95
VSX2P58304 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.9□□□□□ -1.95
VSX2P58304 MTCYBP37-201ENST00000510642 1133 ntBASIC2.9□□□□□ -1.95
VSX2P58304 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.9□□□□□ -1.95
VSX2P58304 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.9□□□□□ -1.95
VSX2P58304 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.9□□□□□ -1.95
VSX2P58304 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.9□□□□□ -1.95
VSX2P58304 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.9□□□□□ -1.95
VSX2P58304 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.9□□□□□ -1.95
VSX2P58304 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.9□□□□□ -1.95
VSX2P58304 BPTFP1-201ENST00000579209 492 ntBASIC2.9□□□□□ -1.95
VSX2P58304 MAGOH2P-202ENST00000584384 429 ntBASIC2.9□□□□□ -1.95
VSX2P58304 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.9□□□□□ -1.95
VSX2P58304 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.9□□□□□ -1.95
VSX2P58304 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.9□□□□□ -1.95
VSX2P58304 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.9□□□□□ -1.95
VSX2P58304 MTND5P7-201ENST00000413558 1798 ntBASIC2.89□□□□□ -1.95
VSX2P58304 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.89□□□□□ -1.95
VSX2P58304 AC009487.2-201ENST00000420969 6821 ntBASIC2.89□□□□□ -1.95
VSX2P58304 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VSX2P58304 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.89□□□□□ -1.95
VSX2P58304 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.89□□□□□ -1.95
VSX2P58304 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
VSX2P58304 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.89□□□□□ -1.95
VSX2P58304 Y_RNA.110-201ENST00000363220 99 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms