Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SNORA64.4-201ENST00000516632 81 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN6P56747 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.94□□□□□ -1.94
CLDN6P56747 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN6P56747 OR8K4P-201ENST00000534608 872 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN6P56747 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.94□□□□□ -1.94
CLDN6P56747 AC106734.1-201ENST00000568646 663 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.94□□□□□ -1.94
CLDN6P56747 DPRXP5-201ENST00000604662 539 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 KATNBL1P5-201ENST00000605015 517 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.94□□□□□ -1.94
CLDN6P56747 AL450489.1-201ENST00000612071 468 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 AC090116.1-201ENST00000615679 446 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 AC132825.7-201ENST00000638744 335 ntBASIC2.94□□□□□ -1.94
CLDN6P56747 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CLDN6P56747 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.94□□□□□ -1.94
CLDN6P56747 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN6P56747 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN6P56747 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN6P56747 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.93□□□□□ -1.94
CLDN6P56747 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.93□□□□□ -1.94
CLDN6P56747 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN6P56747 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.93□□□□□ -1.94
CLDN6P56747 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CLDN6P56747 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CLDN6P56747 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.93□□□□□ -1.94
CLDN6P56747 RNU6-989P-201ENST00000362756 107 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 RNA5SP383-201ENST00000362934 120 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 SNORD56.4-201ENST00000363883 71 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CLDN6P56747 EI24P2-201ENST00000397776 1076 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 NPM1P10-201ENST00000398310 865 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CLDN6P56747 MTCO3P12-201ENST00000416718 547 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN6P56747 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN6P56747 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.93□□□□□ -1.94
CLDN6P56747 FTH1P1-201ENST00000437933 532 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 AC105272.1-201ENST00000438604 198 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 ISCA1P2-201ENST00000438679 421 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 HMGB3P11-201ENST00000440127 604 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 AC093156.1-201ENST00000440382 670 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.93□□□□□ -1.94
CLDN6P56747 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN6P56747 ARPC3P2-201ENST00000457786 533 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 snoU13.4-201ENST00000458916 104 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 RPS27P29-201ENST00000463110 252 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 AC126389.1-201ENST00000477436 290 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 RNU1-61P-201ENST00000516107 151 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 AC104027.1-201ENST00000521887 300 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CLDN6P56747 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.93□□□□□ -1.94
CLDN6P56747 AL389895.1-201ENST00000554127 252 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 AC104229.1-201ENST00000561364 255 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN6P56747 XIAPP1-201ENST00000603162 600 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 RPL23AP92-201ENST00000603609 255 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 ATP1B3P1-201ENST00000605365 821 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 AC068722.2-201ENST00000618734 544 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 AC006213.5-201ENST00000619673 288 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN6P56747 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLDN6P56747 MFSD8-213ENST00000641134 1327 ntBASIC2.93□□□□□ -1.94
CLDN6P56747 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN6P56747 MTND5P31-201ENST00000419366 1374 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.92□□□□□ -1.94
CLDN6P56747 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN6P56747 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN6P56747 AC062016.1-201ENST00000355719 319 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 RNU6-921P-201ENST00000384361 107 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 MTND3P20-201ENST00000407663 186 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 UBE2V1P15-201ENST00000407776 448 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 RSL24D1P8-201ENST00000434442 492 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN6P56747 AL109933.2-201ENST00000452651 260 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 AC104308.1-201ENST00000454621 333 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 AC117440.1-201ENST00000474107 571 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 AC068724.1-201ENST00000487100 792 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN6P56747 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN6P56747 SCGB1D5P-201ENST00000515134 247 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 SNORA76.2-201ENST00000517095 137 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 AC079600.2-201ENST00000550076 130 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 AC023824.3-201ENST00000569003 562 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 AC074051.3-201ENST00000570238 358 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.92□□□□□ -1.94
CLDN6P56747 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN6P56747 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN6P56747 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN6P56747 AC104763.2-201ENST00000604179 382 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 AL035413.2-201ENST00000604801 525 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN6P56747 AC020658.4-201ENST00000613987 684 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN6P56747 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN6P56747 AC091903.1-201ENST00000624322 454 ntBASIC2.92□□□□□ -1.94
CLDN6P56747 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN6P56747 AC139713.2-210ENST00000641741 992 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms