Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC005832.2-201ENST00000538921 1430 ntBASIC4.21□□□□□ -1.74
SUMO3P55854 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.2□□□□□ -1.74
SUMO3P55854 OR14L1P-202ENST00000641545 3009 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.2□□□□□ -1.74
SUMO3P55854 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SUMO3P55854 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.2□□□□□ -1.74
SUMO3P55854 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 OR1S2-201ENST00000302592 978 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 RNU6-181P-201ENST00000363225 107 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SUMO3P55854 RNU2-43P-201ENST00000410306 190 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 RNU4-65P-201ENST00000410473 140 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.2□□□□□ -1.74
SUMO3P55854 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 MTCO2P11-201ENST00000431069 680 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 AL049745.1-201ENST00000433953 286 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.2□□□□□ -1.74
SUMO3P55854 AC005008.1-201ENST00000456151 612 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.2□□□□□ -1.74
SUMO3P55854 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.2□□□□□ -1.74
SUMO3P55854 RPL35AP28-201ENST00000459730 331 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 RPL23AP65-201ENST00000475608 468 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.2□□□□□ -1.74
SUMO3P55854 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
SUMO3P55854 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.2□□□□□ -1.74
SUMO3P55854 SAP18P1-201ENST00000512058 390 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 AC007016.1-201ENST00000512110 244 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.2□□□□□ -1.74
SUMO3P55854 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.2□□□□□ -1.74
SUMO3P55854 RNU6-314P-201ENST00000516574 104 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 RNU6-445P-201ENST00000516949 107 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 MTND4LP26-201ENST00000518144 282 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.2□□□□□ -1.74
SUMO3P55854 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.2□□□□□ -1.74
SUMO3P55854 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.2□□□□□ -1.74
SUMO3P55854 MED28P5-201ENST00000528254 438 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.2□□□□□ -1.74
SUMO3P55854 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.2□□□□□ -1.74
SUMO3P55854 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.2□□□□□ -1.74
SUMO3P55854 AL390726.5-202ENST00000564800 256 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.2□□□□□ -1.74
SUMO3P55854 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.2□□□□□ -1.74
SUMO3P55854 AC010928.3-201ENST00000587712 541 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 AC068790.5-201ENST00000602741 355 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 AC126118.1-201ENST00000607744 628 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 SNORD91B-202ENST00000608459 222 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 Mico1.1-201ENST00000611698 204 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 MIR6780A-201ENST00000615089 68 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 CR381653.2-201ENST00000624041 768 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 MIR6863-201ENST00000636112 90 ntBASIC4.2□□□□□ -1.74
SUMO3P55854 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.2□□□□□ -1.74
SUMO3P55854 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.2□□□□□ -1.74
SUMO3P55854 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.2□□□□□ -1.74
SUMO3P55854 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.2□□□□□ -1.74
SUMO3P55854 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
SUMO3P55854 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.2□□□□□ -1.74
SUMO3P55854 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.2□□□□□ -1.74
SUMO3P55854 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.2□□□□□ -1.74
SUMO3P55854 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SUMO3P55854 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.2□□□□□ -1.74
SUMO3P55854 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.19□□□□□ -1.74
SUMO3P55854 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SUMO3P55854 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SUMO3P55854 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.19□□□□□ -1.74
SUMO3P55854 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SUMO3P55854 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SUMO3P55854 OR5J1P-201ENST00000313544 939 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 OR4G2P-201ENST00000328113 903 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 RNA5SP235-201ENST00000365411 114 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 RNU6-1074P-201ENST00000383995 104 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 RPL17P50-201ENST00000396131 546 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AL109755.1-201ENST00000401791 649 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 ELOCP4-201ENST00000420090 333 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 FAR2P4-202ENST00000425399 584 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.19□□□□□ -1.74
SUMO3P55854 AC073464.1-201ENST00000429823 534 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AL451074.3-201ENST00000437709 472 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.19□□□□□ -1.74
SUMO3P55854 Z80107.2-201ENST00000445127 392 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 NDUFS5P3-201ENST00000450668 321 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 NANOGP10-201ENST00000453325 895 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AC010326.1-201ENST00000462726 602 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.19□□□□□ -1.74
SUMO3P55854 AC007182.2-201ENST00000489251 402 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 IGLV2-34-201ENST00000490007 283 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AC023194.1-201ENST00000493084 308 ntBASIC4.19□□□□□ -1.74
SUMO3P55854 AC108022.1-201ENST00000493466 478 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms