Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL136126.1-201ENST00000473603 402 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AP001086.1-201ENST00000494882 321 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AC093767.1-201ENST00000504523 156 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AC114322.1-201ENST00000506771 926 ntBASIC3.1□□□□□ -1.91
LIM2P55344 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.1□□□□□ -1.91
LIM2P55344 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.1□□□□□ -1.91
LIM2P55344 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.1□□□□□ -1.91
LIM2P55344 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.1□□□□□ -1.91
LIM2P55344 UBE2NP1-201ENST00000545592 458 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AC090502.2-201ENST00000549267 280 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.1□□□□□ -1.91
LIM2P55344 MTCYBP23-201ENST00000558717 1102 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.1□□□□□ -1.91
LIM2P55344 AC073657.2-201ENST00000605661 303 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AP001521.1-201ENST00000609150 300 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AC069200.1-201ENST00000609511 323 ntBASIC3.1□□□□□ -1.91
LIM2P55344 AC010608.3-201ENST00000625048 527 ntBASIC3.1□□□□□ -1.91
LIM2P55344 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIM2P55344 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
LIM2P55344 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LIM2P55344 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.1□□□□□ -1.91
LIM2P55344 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIM2P55344 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIM2P55344 CDR1-202ENST00000625883 1485 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.09□□□□□ -1.91
LIM2P55344 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LIM2P55344 AL133383.2-201ENST00000622958 2336 ntBASIC3.09□□□□□ -1.91
LIM2P55344 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.09□□□□□ -1.91
LIM2P55344 RPL7P26-201ENST00000333817 754 ntBASIC3.09□□□□□ -1.91
LIM2P55344 RNA5SP267-201ENST00000364893 126 ntBASIC3.09□□□□□ -1.91
LIM2P55344 RNU6-805P-201ENST00000365643 106 ntBASIC3.09□□□□□ -1.91
LIM2P55344 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
LIM2P55344 RNU6-413P-201ENST00000384115 107 ntBASIC3.09□□□□□ -1.91
LIM2P55344 Y_RNA.493-201ENST00000384422 102 ntBASIC3.09□□□□□ -1.91
LIM2P55344 SNORD116-12-201ENST00000384468 92 ntBASIC3.09□□□□□ -1.91
LIM2P55344 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AC009237.5-201ENST00000414271 501 ntBASIC3.09□□□□□ -1.91
LIM2P55344 RPS3AP37-201ENST00000419176 745 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AC245291.1-201ENST00000419501 328 ntBASIC3.09□□□□□ -1.91
LIM2P55344 MTND2P16-201ENST00000419987 799 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AC005300.1-201ENST00000428401 373 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.09□□□□□ -1.91
LIM2P55344 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
LIM2P55344 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.09□□□□□ -1.91
LIM2P55344 RPL23AP22-201ENST00000437556 453 ntBASIC3.09□□□□□ -1.91
LIM2P55344 CST9LP2-201ENST00000437612 320 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.09□□□□□ -1.91
LIM2P55344 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.09□□□□□ -1.91
LIM2P55344 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.09□□□□□ -1.91
LIM2P55344 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.09□□□□□ -1.91
LIM2P55344 EXTL2P1-201ENST00000446218 416 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.09□□□□□ -1.91
LIM2P55344 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.09□□□□□ -1.91
LIM2P55344 AC092451.1-201ENST00000480211 153 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.09□□□□□ -1.91
LIM2P55344 HSPD1P15-201ENST00000505573 1122 ntBASIC3.09□□□□□ -1.91
LIM2P55344 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.09□□□□□ -1.91
LIM2P55344 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.09□□□□□ -1.91
LIM2P55344 AC010460.2-201ENST00000509054 677 ntBASIC3.09□□□□□ -1.91
LIM2P55344 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.09□□□□□ -1.91
LIM2P55344 RNU1-143P-201ENST00000516296 146 ntBASIC3.09□□□□□ -1.91
LIM2P55344 RNU2-58P-201ENST00000516403 183 ntBASIC3.09□□□□□ -1.91
LIM2P55344 RN7SKP289-201ENST00000517244 295 ntBASIC3.09□□□□□ -1.91
LIM2P55344 OR10V3P-201ENST00000525712 725 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.09□□□□□ -1.91
LIM2P55344 HIGD1AP1-201ENST00000550979 275 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.09□□□□□ -1.91
LIM2P55344 HIGD1AP17-201ENST00000554576 276 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AC138915.2-201ENST00000569776 97 ntBASIC3.09□□□□□ -1.91
LIM2P55344 MTND3P13-201ENST00000574391 343 ntBASIC3.09□□□□□ -1.91
LIM2P55344 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.09□□□□□ -1.91
LIM2P55344 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.09□□□□□ -1.91
LIM2P55344 BNIP3P24-201ENST00000593398 557 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AC245884.10-201ENST00000597355 337 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AC011458.1-201ENST00000604034 617 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AL160237.3-201ENST00000604114 1013 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AC016877.3-201ENST00000606778 504 ntBASIC3.09□□□□□ -1.91
LIM2P55344 U1.23-201ENST00000610293 146 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AC016597.2-201ENST00000613256 341 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AL157817.1-201ENST00000614264 790 ntBASIC3.09□□□□□ -1.91
LIM2P55344 RNU1-68P-201ENST00000615382 146 ntBASIC3.09□□□□□ -1.91
LIM2P55344 AC009464.1-201ENST00000615731 469 ntBASIC3.09□□□□□ -1.91
LIM2P55344 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.09□□□□□ -1.91
LIM2P55344 U1.39-201ENST00000621562 146 ntBASIC3.09□□□□□ -1.91
LIM2P55344 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.09□□□□□ -1.91
LIM2P55344 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.09□□□□□ -1.91
LIM2P55344 OR4G3P-201ENST00000633500 913 ntBASIC3.09□□□□□ -1.91
LIM2P55344 CYP3A51P-201ENST00000633513 256 ntBASIC3.09□□□□□ -1.91
LIM2P55344 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.09□□□□□ -1.91
LIM2P55344 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.09□□□□□ -1.92
LIM2P55344 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LIM2P55344 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
LIM2P55344 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.08□□□□□ -1.92
LIM2P55344 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIM2P55344 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
LIM2P55344 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIM2P55344 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LIM2P55344 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LIM2P55344 SNORA63.1-201ENST00000362493 131 ntBASIC3.08□□□□□ -1.92
LIM2P55344 RNU5D-1-201ENST00000363299 116 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms