Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXG1P55316 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXG1P55316 AC068446.3-201ENST00000555285 382 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 AL121821.2-201ENST00000556081 394 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 CYCSP2-201ENST00000558168 301 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 MIR4284-201ENST00000578924 81 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 AC090312.2-201ENST00000582687 378 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 MIR3138-201ENST00000585238 82 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 AC079587.1-201ENST00000603846 277 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 AL136363.1-201ENST00000605349 337 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 AC097468.3-201ENST00000607956 456 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 AP004247.3-201ENST00000608682 624 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 AL132765.2-201ENST00000610812 351 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 AC114781.5-201ENST00000615297 108 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXG1P55316 AP000843.1-201ENST00000624880 701 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 OR52H1-202ENST00000641796 1061 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXG1P55316 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXG1P55316 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXG1P55316 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXG1P55316 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
FOXG1P55316 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXG1P55316 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
FOXG1P55316 FARSBP1-201ENST00000435808 1778 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 AP000756.2-201ENST00000624168 2567 ntBASIC3.86□□□□□ -1.79
FOXG1P55316 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXG1P55316 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXG1P55316 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXG1P55316 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXG1P55316 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXG1P55316 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
FOXG1P55316 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
FOXG1P55316 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXG1P55316 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXG1P55316 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXG1P55316 Y_RNA.25-201ENST00000362528 102 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 RNU6-845P-201ENST00000362578 103 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 Y_RNA.138-201ENST00000363462 102 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 SNORD81.2-201ENST00000365153 76 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 MIR3065-201ENST00000390137 79 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 VN1R8P-201ENST00000407739 893 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 Y_RNA.608-201ENST00000410647 95 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 RPL6P29-201ENST00000414863 865 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXG1P55316 CYCSP10-201ENST00000417973 294 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXG1P55316 PDCL2P1-201ENST00000419302 352 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXG1P55316 AL158073.1-201ENST00000426848 1104 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXG1P55316 AC073069.1-201ENST00000428657 441 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 DYNLL1P7-201ENST00000429273 258 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXG1P55316 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXG1P55316 AC114495.1-201ENST00000441274 436 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
FOXG1P55316 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXG1P55316 AC073587.1-201ENST00000447093 876 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXG1P55316 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXG1P55316 C1DP4-201ENST00000455429 424 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 RPS20P20-201ENST00000460498 340 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 AC007537.2-201ENST00000472093 511 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 RN7SL860P-201ENST00000473738 223 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXG1P55316 FAM172BP-201ENST00000487497 1089 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 AC096576.1-201ENST00000489014 359 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 AC083829.1-201ENST00000503756 657 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXG1P55316 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXG1P55316 AC002456.2-201ENST00000509356 380 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 KCTD9P2-201ENST00000512203 1013 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 AC015795.1-201ENST00000513669 327 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 RNU6-583P-201ENST00000516012 92 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 RNU2-46P-201ENST00000517038 113 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 IGKV2-36-201ENST00000519999 223 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXG1P55316 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXG1P55316 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXG1P55316 AP000790.1-201ENST00000528891 737 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.85□□□□□ -1.79
FOXG1P55316 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
FOXG1P55316 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXG1P55316 AL512310.1-201ENST00000548639 172 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.85□□□□□ -1.79
FOXG1P55316 AC011712.1-201ENST00000588959 234 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.85□□□□□ -1.79
FOXG1P55316 AC012507.3-201ENST00000603556 477 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 AL391646.1-201ENST00000603860 190 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 AC113403.1-201ENST00000604910 193 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXG1P55316 AC116447.1-201ENST00000613153 453 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.85□□□□□ -1.79
FOXG1P55316 AC007546.2-201ENST00000623996 360 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 CDRT1-208ENST00000630868 794 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 MTND5P42-201ENST00000637720 498 ntBASIC3.85□□□□□ -1.79
FOXG1P55316 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXG1P55316 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXG1P55316 MAPK10-303ENST00000641324 3959 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms