Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH4P55283 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH4P55283 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
CDH4P55283 AC019227.1-201ENST00000526902 510 ntBASIC3.21□□□□□ -1.9
CDH4P55283 AC006518.2-201ENST00000542513 940 ntBASIC3.21□□□□□ -1.9
CDH4P55283 AC093510.2-201ENST00000562820 896 ntBASIC3.21□□□□□ -1.9
CDH4P55283 AL109653.1-201ENST00000603091 248 ntBASIC3.21□□□□□ -1.9
CDH4P55283 AP005229.2-201ENST00000609980 697 ntBASIC3.21□□□□□ -1.9
CDH4P55283 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH4P55283 AL390240.1-201ENST00000612950 384 ntBASIC3.21□□□□□ -1.9
CDH4P55283 VN1R74P-201ENST00000613259 503 ntBASIC3.21□□□□□ -1.9
CDH4P55283 AC009318.4-201ENST00000620496 486 ntBASIC3.21□□□□□ -1.9
CDH4P55283 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH4P55283 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH4P55283 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH4P55283 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH4P55283 AL512283.1-201ENST00000606756 1384 ntBASIC3.21□□□□□ -1.9
CDH4P55283 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.2□□□□□ -1.9
CDH4P55283 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH4P55283 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CDH4P55283 AL591034.1-201ENST00000407447 340 ntBASIC3.2□□□□□ -1.9
CDH4P55283 RNU6-712P-201ENST00000410558 100 ntBASIC3.2□□□□□ -1.9
CDH4P55283 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH4P55283 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH4P55283 RPL32P35-201ENST00000415214 394 ntBASIC3.2□□□□□ -1.9
CDH4P55283 UBE2D3P3-201ENST00000426992 425 ntBASIC3.2□□□□□ -1.9
CDH4P55283 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH4P55283 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH4P55283 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH4P55283 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH4P55283 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH4P55283 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH4P55283 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH4P55283 MTCO3P2-201ENST00000457365 171 ntBASIC3.2□□□□□ -1.9
CDH4P55283 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH4P55283 ST13P14-201ENST00000474095 734 ntBASIC3.2□□□□□ -1.9
CDH4P55283 VPS26AP1-201ENST00000483197 979 ntBASIC3.2□□□□□ -1.9
CDH4P55283 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH4P55283 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH4P55283 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH4P55283 RNU6-885P-201ENST00000516607 104 ntBASIC3.2□□□□□ -1.9
CDH4P55283 AP001207.2-201ENST00000519490 539 ntBASIC3.2□□□□□ -1.9
CDH4P55283 OR4P1P-201ENST00000530808 1136 ntBASIC3.2□□□□□ -1.9
CDH4P55283 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDH4P55283 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH4P55283 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH4P55283 AC005951.1-201ENST00000576706 485 ntBASIC3.2□□□□□ -1.9
CDH4P55283 MIR4474-201ENST00000579189 78 ntBASIC3.2□□□□□ -1.9
CDH4P55283 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH4P55283 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH4P55283 AC005776.1-201ENST00000603164 290 ntBASIC3.2□□□□□ -1.9
CDH4P55283 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDH4P55283 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.2□□□□□ -1.9
CDH4P55283 AL590240.3-201ENST00000621416 943 ntBASIC3.2□□□□□ -1.9
CDH4P55283 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH4P55283 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CDH4P55283 AC244517.1-201ENST00000606030 2086 ntBASIC3.2□□□□□ -1.9
CDH4P55283 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH4P55283 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH4P55283 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
CDH4P55283 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH4P55283 AL136164.4-201ENST00000625013 2135 ntBASIC3.19□□□□□ -1.9
CDH4P55283 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH4P55283 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH4P55283 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
CDH4P55283 RNU6-582P-201ENST00000362989 107 ntBASIC3.19□□□□□ -1.9
CDH4P55283 RNU6-354P-201ENST00000383862 107 ntBASIC3.19□□□□□ -1.9
CDH4P55283 RNU6-610P-201ENST00000384264 107 ntBASIC3.19□□□□□ -1.9
CDH4P55283 SNORD116-23-201ENST00000384645 92 ntBASIC3.19□□□□□ -1.9
CDH4P55283 RPL7P25-201ENST00000404151 721 ntBASIC3.19□□□□□ -1.9
CDH4P55283 AL024507.1-201ENST00000412741 274 ntBASIC3.19□□□□□ -1.9
CDH4P55283 AL133384.1-201ENST00000412744 351 ntBASIC3.19□□□□□ -1.9
CDH4P55283 FCF1P2-201ENST00000415284 583 ntBASIC3.19□□□□□ -1.9
CDH4P55283 AC245291.1-201ENST00000419501 328 ntBASIC3.19□□□□□ -1.9
CDH4P55283 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.19□□□□□ -1.9
CDH4P55283 SFR1P2-201ENST00000421841 730 ntBASIC3.19□□□□□ -1.9
CDH4P55283 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH4P55283 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH4P55283 RPL31P54-201ENST00000429803 370 ntBASIC3.19□□□□□ -1.9
CDH4P55283 RPL23AP69-201ENST00000431134 458 ntBASIC3.19□□□□□ -1.9
CDH4P55283 AC005345.1-201ENST00000431868 217 ntBASIC3.19□□□□□ -1.9
CDH4P55283 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH4P55283 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH4P55283 AC016696.1-201ENST00000446949 318 ntBASIC3.19□□□□□ -1.9
CDH4P55283 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH4P55283 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH4P55283 RPS23P3-201ENST00000470993 430 ntBASIC3.19□□□□□ -1.9
CDH4P55283 AC093767.1-201ENST00000504523 156 ntBASIC3.19□□□□□ -1.9
CDH4P55283 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH4P55283 RNU1-143P-201ENST00000516296 146 ntBASIC3.19□□□□□ -1.9
CDH4P55283 SNORA64.4-201ENST00000516632 81 ntBASIC3.19□□□□□ -1.9
CDH4P55283 RNA5SP135-201ENST00000517019 125 ntBASIC3.19□□□□□ -1.9
CDH4P55283 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH4P55283 PSMA2P1-201ENST00000526365 646 ntBASIC3.19□□□□□ -1.9
CDH4P55283 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH4P55283 MIR3200-201ENST00000580767 85 ntBASIC3.19□□□□□ -1.9
CDH4P55283 AP001029.3-201ENST00000588063 596 ntBASIC3.19□□□□□ -1.9
CDH4P55283 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH4P55283 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH4P55283 AC092474.3-201ENST00000603022 568 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms