Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MIR492-201ENST00000638676 116 ntBASIC4.43□□□□□ -1.7
COPAP53621 MTND5P29-201ENST00000458676 1807 ntBASIC4.43□□□□□ -1.7
COPAP53621 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COPAP53621 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.43□□□□□ -1.7
COPAP53621 AC011266.1-201ENST00000624119 3569 ntBASIC4.43□□□□□ -1.7
COPAP53621 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
COPAP53621 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPAP53621 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
COPAP53621 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.42□□□□□ -1.7
COPAP53621 OR11H4-201ENST00000315409 1082 ntBASIC4.42□□□□□ -1.7
COPAP53621 RNU1-15P-201ENST00000353977 144 ntBASIC4.42□□□□□ -1.7
COPAP53621 AL161781.1-201ENST00000354277 403 ntBASIC4.42□□□□□ -1.7
COPAP53621 RNA5SP189-201ENST00000364920 115 ntBASIC4.42□□□□□ -1.7
COPAP53621 RNU1-63P-201ENST00000383902 164 ntBASIC4.42□□□□□ -1.7
COPAP53621 RNU1-13P-201ENST00000384499 162 ntBASIC4.42□□□□□ -1.7
COPAP53621 MIR513A2-201ENST00000385249 127 ntBASIC4.42□□□□□ -1.7
COPAP53621 RNA5SP317-201ENST00000410176 116 ntBASIC4.42□□□□□ -1.7
COPAP53621 RN7SKP56-201ENST00000410513 331 ntBASIC4.42□□□□□ -1.7
COPAP53621 Y_RNA.619-201ENST00000410951 90 ntBASIC4.42□□□□□ -1.7
COPAP53621 RNA5SP311-201ENST00000411290 116 ntBASIC4.42□□□□□ -1.7
COPAP53621 MTCO1P21-201ENST00000416634 589 ntBASIC4.42□□□□□ -1.7
COPAP53621 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.42□□□□□ -1.7
COPAP53621 AC004552.1-201ENST00000419089 348 ntBASIC4.42□□□□□ -1.7
COPAP53621 RPL21P32-201ENST00000419877 477 ntBASIC4.42□□□□□ -1.7
COPAP53621 AC007742.1-201ENST00000425789 329 ntBASIC4.42□□□□□ -1.7
COPAP53621 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.42□□□□□ -1.7
COPAP53621 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.42□□□□□ -1.7
COPAP53621 MTND1P28-201ENST00000435623 950 ntBASIC4.42□□□□□ -1.7
COPAP53621 ELOCP26-201ENST00000436067 329 ntBASIC4.42□□□□□ -1.7
COPAP53621 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COPAP53621 AL138799.3-201ENST00000438968 350 ntBASIC4.42□□□□□ -1.7
COPAP53621 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.42□□□□□ -1.7
COPAP53621 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.42□□□□□ -1.7
COPAP53621 AL590399.6-201ENST00000446396 307 ntBASIC4.42□□□□□ -1.7
COPAP53621 RPL7P52-201ENST00000449200 742 ntBASIC4.42□□□□□ -1.7
COPAP53621 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COPAP53621 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COPAP53621 AP001992.1-205ENST00000462248 379 ntBASIC4.42□□□□□ -1.7
COPAP53621 RPS26P3-201ENST00000470205 348 ntBASIC4.42□□□□□ -1.7
COPAP53621 AC090543.2-201ENST00000483963 348 ntBASIC4.42□□□□□ -1.7
COPAP53621 AC004057.1-201ENST00000485827 348 ntBASIC4.42□□□□□ -1.7
COPAP53621 RPL35P6-201ENST00000490024 372 ntBASIC4.42□□□□□ -1.7
COPAP53621 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.42□□□□□ -1.7
COPAP53621 AC023424.2-201ENST00000493479 777 ntBASIC4.42□□□□□ -1.7
COPAP53621 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.42□□□□□ -1.7
COPAP53621 AC078918.1-201ENST00000498515 228 ntBASIC4.42□□□□□ -1.7
COPAP53621 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.42□□□□□ -1.7
COPAP53621 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.42□□□□□ -1.7
COPAP53621 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.42□□□□□ -1.7
COPAP53621 CDC42P4-201ENST00000510507 563 ntBASIC4.42□□□□□ -1.7
COPAP53621 AC008958.1-201ENST00000511047 682 ntBASIC4.42□□□□□ -1.7
COPAP53621 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.42□□□□□ -1.7
COPAP53621 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.42□□□□□ -1.7
COPAP53621 RNA5SP315-201ENST00000516340 116 ntBASIC4.42□□□□□ -1.7
COPAP53621 RNA5SP73-201ENST00000516744 108 ntBASIC4.42□□□□□ -1.7
COPAP53621 RNA5SP312-201ENST00000517068 116 ntBASIC4.42□□□□□ -1.7
COPAP53621 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.42□□□□□ -1.7
COPAP53621 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.42□□□□□ -1.7
COPAP53621 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.42□□□□□ -1.7
COPAP53621 AP002453.2-201ENST00000533503 320 ntBASIC4.42□□□□□ -1.7
COPAP53621 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.42□□□□□ -1.7
COPAP53621 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.42□□□□□ -1.7
COPAP53621 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.42□□□□□ -1.7
COPAP53621 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.42□□□□□ -1.7
COPAP53621 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COPAP53621 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.42□□□□□ -1.7
COPAP53621 VN1R85P-201ENST00000601587 426 ntBASIC4.42□□□□□ -1.7
COPAP53621 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.42□□□□□ -1.7
COPAP53621 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.42□□□□□ -1.7
COPAP53621 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
COPAP53621 AC068254.2-201ENST00000623938 3577 ntBASIC4.42□□□□□ -1.7
COPAP53621 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
COPAP53621 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COPAP53621 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COPAP53621 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.42□□□□□ -1.7
COPAP53621 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.42□□□□□ -1.7
COPAP53621 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
COPAP53621 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.42□□□□□ -1.7
COPAP53621 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
COPAP53621 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COPAP53621 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
COPAP53621 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COPAP53621 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COPAP53621 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COPAP53621 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.41□□□□□ -1.7
COPAP53621 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COPAP53621 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.41□□□□□ -1.7
COPAP53621 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COPAP53621 SNORD74.4-201ENST00000364129 80 ntBASIC4.41□□□□□ -1.7
COPAP53621 RNU5E-5P-201ENST00000365379 116 ntBASIC4.41□□□□□ -1.7
COPAP53621 RNU6-761P-201ENST00000384148 107 ntBASIC4.41□□□□□ -1.7
COPAP53621 SNORA75-201ENST00000384158 137 ntBASIC4.41□□□□□ -1.7
COPAP53621 RNU6-769P-201ENST00000384407 104 ntBASIC4.41□□□□□ -1.7
COPAP53621 Y_RNA.517-201ENST00000384551 106 ntBASIC4.41□□□□□ -1.7
COPAP53621 AL583835.1-201ENST00000399570 407 ntBASIC4.41□□□□□ -1.7
COPAP53621 AL022722.2-201ENST00000402519 180 ntBASIC4.41□□□□□ -1.7
COPAP53621 Y_RNA.599-201ENST00000410489 109 ntBASIC4.41□□□□□ -1.7
COPAP53621 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.41□□□□□ -1.7
COPAP53621 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.41□□□□□ -1.7
COPAP53621 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms