Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
BRCA2P51587 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.3□□□□□ -2.04
BRCA2P51587 RPS7P2-201ENST00000435134 607 ntBASIC2.3□□□□□ -2.04
BRCA2P51587 CACYBPP1-201ENST00000438592 684 ntBASIC2.3□□□□□ -2.04
BRCA2P51587 AL591719.1-201ENST00000444669 744 ntBASIC2.3□□□□□ -2.04
BRCA2P51587 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.3□□□□□ -2.04
BRCA2P51587 RPL23AP63-201ENST00000498752 471 ntBASIC2.3□□□□□ -2.04
BRCA2P51587 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
BRCA2P51587 AC110588.1-201ENST00000559699 137 ntBASIC2.3□□□□□ -2.04
BRCA2P51587 AC091834.1-201ENST00000614543 472 ntBASIC2.3□□□□□ -2.04
BRCA2P51587 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
BRCA2P51587 RPS24P8-201ENST00000431490 402 ntBASIC2.29□□□□□ -2.04
BRCA2P51587 AC133473.1-201ENST00000455173 299 ntBASIC2.29□□□□□ -2.04
BRCA2P51587 AC092798.1-201ENST00000458542 409 ntBASIC2.29□□□□□ -2.04
BRCA2P51587 TMEM248P1-201ENST00000510579 951 ntBASIC2.29□□□□□ -2.04
BRCA2P51587 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.29□□□□□ -2.04
BRCA2P51587 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.29□□□□□ -2.04
BRCA2P51587 AC010872.1-201ENST00000624225 675 ntBASIC2.29□□□□□ -2.04
BRCA2P51587 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
BRCA2P51587 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
BRCA2P51587 RNU6-342P-201ENST00000384521 104 ntBASIC2.29□□□□□ -2.04
BRCA2P51587 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.29□□□□□ -2.04
BRCA2P51587 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.29□□□□□ -2.04
BRCA2P51587 AC104332.2-201ENST00000429959 156 ntBASIC2.29□□□□□ -2.04
BRCA2P51587 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.29□□□□□ -2.04
BRCA2P51587 RNU7-95P-201ENST00000459222 64 ntBASIC2.29□□□□□ -2.04
BRCA2P51587 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.29□□□□□ -2.04
BRCA2P51587 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.29□□□□□ -2.04
BRCA2P51587 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.29□□□□□ -2.04
BRCA2P51587 RNU1-57P-201ENST00000384491 166 ntBASIC2.29□□□□□ -2.04
BRCA2P51587 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.29□□□□□ -2.04
BRCA2P51587 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.29□□□□□ -2.04
BRCA2P51587 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.29□□□□□ -2.04
BRCA2P51587 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.29□□□□□ -2.04
BRCA2P51587 AP003467.2-201ENST00000520175 319 ntBASIC2.29□□□□□ -2.04
BRCA2P51587 AL354943.1-201ENST00000572103 781 ntBASIC2.29□□□□□ -2.04
BRCA2P51587 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2.29□□□□□ -2.04
BRCA2P51587 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
BRCA2P51587 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
BRCA2P51587 Y_RNA.354-201ENST00000365448 111 ntBASIC2.28□□□□□ -2.04
BRCA2P51587 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
BRCA2P51587 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.28□□□□□ -2.04
BRCA2P51587 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.28□□□□□ -2.04
BRCA2P51587 SETP1-201ENST00000556014 845 ntBASIC2.28□□□□□ -2.04
BRCA2P51587 AL731537.2-201ENST00000561565 951 ntBASIC2.28□□□□□ -2.04
BRCA2P51587 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.28□□□□□ -2.04
BRCA2P51587 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
BRCA2P51587 SDCBPP3-201ENST00000419629 891 ntBASIC2.28□□□□□ -2.04
BRCA2P51587 RMST_9.1-201ENST00000619945 193 ntBASIC2.28□□□□□ -2.04
BRCA2P51587 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
BRCA2P51587 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.27□□□□□ -2.05
BRCA2P51587 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.27□□□□□ -2.05
BRCA2P51587 AC008173.1-201ENST00000418901 264 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.27□□□□□ -2.05
BRCA2P51587 AC135279.1-201ENST00000543493 504 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC2.27□□□□□ -2.05
BRCA2P51587 AC090543.1-201ENST00000492168 485 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 AC022882.1-201ENST00000532142 501 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.27□□□□□ -2.05
BRCA2P51587 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.27□□□□□ -2.05
BRCA2P51587 BX248123.2-201ENST00000606318 124 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.27□□□□□ -2.05
BRCA2P51587 U7.8-201ENST00000619968 63 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
BRCA2P51587 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
BRCA2P51587 RN7SKP226-201ENST00000364912 300 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.27□□□□□ -2.05
BRCA2P51587 RPS7P5-201ENST00000441482 581 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 TXNP6-201ENST00000510190 310 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 OR4P1P-201ENST00000530808 1136 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.27□□□□□ -2.05
BRCA2P51587 AC092650.2-201ENST00000619984 902 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 MTND5P23-201ENST00000430812 1655 ntBASIC2.27□□□□□ -2.05
BRCA2P51587 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
BRCA2P51587 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.26□□□□□ -2.05
BRCA2P51587 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.26□□□□□ -2.05
BRCA2P51587 AL645944.1-201ENST00000603857 493 ntBASIC2.26□□□□□ -2.05
BRCA2P51587 AC007620.3-201ENST00000608131 497 ntBASIC2.26□□□□□ -2.05
BRCA2P51587 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
BRCA2P51587 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC2.26□□□□□ -2.05
BRCA2P51587 AC009501.3-201ENST00000605001 1352 ntBASIC2.26□□□□□ -2.05
BRCA2P51587 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
BRCA2P51587 SETP15-201ENST00000412724 337 ntBASIC2.26□□□□□ -2.05
BRCA2P51587 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.26□□□□□ -2.05
BRCA2P51587 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
BRCA2P51587 MTAPP1-201ENST00000489154 819 ntBASIC2.26□□□□□ -2.05
BRCA2P51587 RPS6P4-201ENST00000494693 758 ntBASIC2.26□□□□□ -2.05
BRCA2P51587 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.26□□□□□ -2.05
BRCA2P51587 RNA5SP182-201ENST00000516064 82 ntBASIC2.26□□□□□ -2.05
BRCA2P51587 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.26□□□□□ -2.05
BRCA2P51587 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.26□□□□□ -2.05
BRCA2P51587 MIR4285-201ENST00000581001 85 ntBASIC2.26□□□□□ -2.05
BRCA2P51587 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.26□□□□□ -2.05
BRCA2P51587 OR5H15-201ENST00000383696 930 ntBASIC2.25□□□□□ -2.05
BRCA2P51587 AC140059.1-201ENST00000489238 361 ntBASIC2.25□□□□□ -2.05
BRCA2P51587 AC021146.5-201ENST00000503544 545 ntBASIC2.25□□□□□ -2.05
BRCA2P51587 PSMA3P-201ENST00000555485 635 ntBASIC2.25□□□□□ -2.05
BRCA2P51587 AC011492.1-201ENST00000600023 315 ntBASIC2.25□□□□□ -2.05
BRCA2P51587 AC012360.2-201ENST00000609349 391 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms