Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.3□□□□□ -1.88
CASP4P49662 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
CASP4P49662 AC073346.2-201ENST00000624724 2058 ntBASIC3.29□□□□□ -1.88
CASP4P49662 AC110774.1-201ENST00000623567 2018 ntBASIC3.29□□□□□ -1.88
CASP4P49662 RNU6-263P-201ENST00000363811 107 ntBASIC3.29□□□□□ -1.88
CASP4P49662 RNU6-207P-201ENST00000384137 107 ntBASIC3.29□□□□□ -1.88
CASP4P49662 RNU6-761P-201ENST00000384148 107 ntBASIC3.29□□□□□ -1.88
CASP4P49662 RPL22P22-201ENST00000395439 379 ntBASIC3.29□□□□□ -1.88
CASP4P49662 AL139098.1-201ENST00000407291 389 ntBASIC3.29□□□□□ -1.88
CASP4P49662 RPS6P14-201ENST00000425165 719 ntBASIC3.29□□□□□ -1.88
CASP4P49662 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CASP4P49662 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.29□□□□□ -1.88
CASP4P49662 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.29□□□□□ -1.88
CASP4P49662 HMGN2P16-201ENST00000456802 261 ntBASIC3.29□□□□□ -1.88
CASP4P49662 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.29□□□□□ -1.88
CASP4P49662 AC117440.1-201ENST00000474107 571 ntBASIC3.29□□□□□ -1.88
CASP4P49662 RPS27AP1-201ENST00000475545 471 ntBASIC3.29□□□□□ -1.88
CASP4P49662 MTCO3P35-201ENST00000485582 781 ntBASIC3.29□□□□□ -1.88
CASP4P49662 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CASP4P49662 MTCO3P44-201ENST00000510977 541 ntBASIC3.29□□□□□ -1.88
CASP4P49662 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.29□□□□□ -1.88
CASP4P49662 RNU5A-7P-201ENST00000515979 116 ntBASIC3.29□□□□□ -1.88
CASP4P49662 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.29□□□□□ -1.88
CASP4P49662 RNA5SP135-201ENST00000517019 125 ntBASIC3.29□□□□□ -1.88
CASP4P49662 RNU6-467P-201ENST00000517027 110 ntBASIC3.29□□□□□ -1.88
CASP4P49662 AC009812.2-201ENST00000517657 457 ntBASIC3.29□□□□□ -1.88
CASP4P49662 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
CASP4P49662 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CASP4P49662 ZNF705CP-201ENST00000530515 889 ntBASIC3.29□□□□□ -1.88
CASP4P49662 OR4R2P-201ENST00000530815 597 ntBASIC3.29□□□□□ -1.88
CASP4P49662 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.29□□□□□ -1.88
CASP4P49662 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
CASP4P49662 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.29□□□□□ -1.88
CASP4P49662 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.29□□□□□ -1.88
CASP4P49662 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.29□□□□□ -1.88
CASP4P49662 OR4T1P-201ENST00000554933 911 ntBASIC3.29□□□□□ -1.88
CASP4P49662 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.29□□□□□ -1.88
CASP4P49662 AC011816.2-201ENST00000607089 556 ntBASIC3.29□□□□□ -1.88
CASP4P49662 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.29□□□□□ -1.88
CASP4P49662 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.29□□□□□ -1.88
CASP4P49662 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.29□□□□□ -1.88
CASP4P49662 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.29□□□□□ -1.88
CASP4P49662 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CASP4P49662 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
CASP4P49662 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CASP4P49662 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CASP4P49662 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CASP4P49662 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CASP4P49662 AL133384.1-201ENST00000412744 351 ntBASIC3.28□□□□□ -1.88
CASP4P49662 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.28□□□□□ -1.88
CASP4P49662 SFR1P2-201ENST00000421841 730 ntBASIC3.28□□□□□ -1.88
CASP4P49662 AC006548.1-201ENST00000427470 102 ntBASIC3.28□□□□□ -1.88
CASP4P49662 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.28□□□□□ -1.88
CASP4P49662 AL590103.1-201ENST00000434488 307 ntBASIC3.28□□□□□ -1.88
CASP4P49662 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.28□□□□□ -1.88
CASP4P49662 RPL23AP16-201ENST00000441715 421 ntBASIC3.28□□□□□ -1.88
CASP4P49662 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.28□□□□□ -1.88
CASP4P49662 NPM1P13-201ENST00000452663 865 ntBASIC3.28□□□□□ -1.88
CASP4P49662 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.28□□□□□ -1.88
CASP4P49662 AC109471.1-201ENST00000511631 612 ntBASIC3.28□□□□□ -1.88
CASP4P49662 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.28□□□□□ -1.88
CASP4P49662 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.28□□□□□ -1.88
CASP4P49662 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.28□□□□□ -1.88
CASP4P49662 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.28□□□□□ -1.88
CASP4P49662 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.28□□□□□ -1.88
CASP4P49662 AP001542.2-201ENST00000593141 364 ntBASIC3.28□□□□□ -1.88
CASP4P49662 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.28□□□□□ -1.88
CASP4P49662 AC068880.4-201ENST00000623082 495 ntBASIC3.28□□□□□ -1.88
CASP4P49662 AL512506.2-201ENST00000624472 458 ntBASIC3.28□□□□□ -1.88
CASP4P49662 CR381572.1-201ENST00000625098 102 ntBASIC3.28□□□□□ -1.88
CASP4P49662 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.28□□□□□ -1.88
CASP4P49662 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CASP4P49662 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CASP4P49662 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.28□□□□□ -1.88
CASP4P49662 AC130650.2-201ENST00000618736 2403 ntBASIC3.28□□□□□ -1.89
CASP4P49662 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.27□□□□□ -1.89
CASP4P49662 AC004925.1-201ENST00000624256 2706 ntBASIC3.27□□□□□ -1.89
CASP4P49662 AL355615.1-201ENST00000406187 641 ntBASIC3.27□□□□□ -1.89
CASP4P49662 RNU4-78P-201ENST00000410940 126 ntBASIC3.27□□□□□ -1.89
CASP4P49662 MTCO3P12-201ENST00000416718 547 ntBASIC3.27□□□□□ -1.89
CASP4P49662 TOMM22P1-201ENST00000418578 312 ntBASIC3.27□□□□□ -1.89
CASP4P49662 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.27□□□□□ -1.89
CASP4P49662 AC000041.1-201ENST00000439655 175 ntBASIC3.27□□□□□ -1.89
CASP4P49662 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.27□□□□□ -1.89
CASP4P49662 RPS24P6-201ENST00000452670 400 ntBASIC3.27□□□□□ -1.89
CASP4P49662 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.27□□□□□ -1.89
CASP4P49662 ARPC3P2-201ENST00000457786 533 ntBASIC3.27□□□□□ -1.89
CASP4P49662 RPL21P41-201ENST00000459863 264 ntBASIC3.27□□□□□ -1.89
CASP4P49662 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.27□□□□□ -1.89
CASP4P49662 HMGB1P22-201ENST00000505315 124 ntBASIC3.27□□□□□ -1.89
CASP4P49662 AC091860.1-201ENST00000505723 432 ntBASIC3.27□□□□□ -1.89
CASP4P49662 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CASP4P49662 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.27□□□□□ -1.89
CASP4P49662 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.27□□□□□ -1.89
CASP4P49662 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.27□□□□□ -1.89
CASP4P49662 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CASP4P49662 AL121603.1-201ENST00000553815 142 ntBASIC3.27□□□□□ -1.89
CASP4P49662 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.27□□□□□ -1.89
CASP4P49662 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.27□□□□□ -1.89
CASP4P49662 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms