Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC093510.2-201ENST00000562820 896 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CR1P49238 MTND4LP25-201ENST00000570218 163 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CR1P49238 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.85□□□□□ -1.95
CX3CR1P49238 AP003973.1-201ENST00000604639 691 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AP000238.1-201ENST00000608759 426 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AC106028.5-201ENST00000610332 395 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AC253576.2-201ENST00000618815 580 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AL353748.2-201ENST00000622148 471 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AC091903.1-201ENST00000624322 454 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CR1P49238 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CX3CR1P49238 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CX3CR1P49238 GDI2P1-201ENST00000429312 1336 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CX3CR1P49238 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.85□□□□□ -1.95
CX3CR1P49238 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CR1P49238 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CX3CR1P49238 AC093908.1-201ENST00000623125 8092 ntBASIC2.85□□□□□ -1.95
CX3CR1P49238 AC008264.2-201ENST00000610193 3731 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CX3CR1P49238 SNORA63.3-201ENST00000362682 132 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CX3CR1P49238 RNU6-207P-201ENST00000384137 107 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 MIR217-201ENST00000384817 110 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AC245052.5-201ENST00000416320 649 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AC092634.6-201ENST00000418558 192 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.84□□□□□ -1.95
CX3CR1P49238 TRIAP1P1-201ENST00000427062 225 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 RAC1P8-201ENST00000427086 527 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 Z93242.1-201ENST00000427102 353 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CR1P49238 MTCYBP15-201ENST00000433123 1127 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AC122718.1-201ENST00000439448 744 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.84□□□□□ -1.95
CX3CR1P49238 RNA5SP310-201ENST00000459084 116 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AL049829.1-201ENST00000465411 156 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CR1P49238 MTCO3P27-201ENST00000514397 196 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AC112198.4-201ENST00000515450 351 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 RNU6-1095P-201ENST00000516148 108 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 RNU1-143P-201ENST00000516296 146 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CR1P49238 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.84□□□□□ -1.95
CX3CR1P49238 MIR4666A-201ENST00000580160 79 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AC090330.1-201ENST00000588646 764 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CR1P49238 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AP001542.2-201ENST00000593141 364 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AC009220.3-201ENST00000604318 586 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AC010738.1-201ENST00000604970 987 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AP005137.2-201ENST00000609238 400 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 U1.23-201ENST00000610293 146 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 RNU1-68P-201ENST00000615382 146 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AL355365.1-201ENST00000616480 294 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 U1.39-201ENST00000621562 146 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AC006111.3-201ENST00000622137 383 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.84□□□□□ -1.95
CX3CR1P49238 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.84□□□□□ -1.95
CX3CR1P49238 AC026634.1-201ENST00000634369 198 ntBASIC2.84□□□□□ -1.95
CX3CR1P49238 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CX3CR1P49238 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
CX3CR1P49238 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.83□□□□□ -1.96
CX3CR1P49238 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CX3CR1P49238 Z83843.1-201ENST00000604070 3685 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CX3CR1P49238 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 RNU5B-1-201ENST00000363286 116 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 U3.6-201ENST00000363622 211 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 SNORA51.4-201ENST00000364993 124 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 SNORA62.3-201ENST00000365110 153 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 AC234772.1-201ENST00000377927 937 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 ARF4P3-201ENST00000397387 509 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 RPS3AP26-201ENST00000398259 784 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 NDUFB4P5-201ENST00000415445 361 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 OR1AA1P-201ENST00000419597 916 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 SDCBPP3-201ENST00000419629 891 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 RPL7P46-201ENST00000425129 740 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.83□□□□□ -1.96
CX3CR1P49238 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.83□□□□□ -1.96
CX3CR1P49238 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.83□□□□□ -1.96
CX3CR1P49238 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CX3CR1P49238 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CX3CR1P49238 HMGN1P5-201ENST00000448591 263 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 COX6CP18-201ENST00000448769 222 ntBASIC2.83□□□□□ -1.96
CX3CR1P49238 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.83□□□□□ -1.96
CX3CR1P49238 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms