Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CSNK1A1P48729 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CSNK1A1P48729 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CSNK1A1P48729 RNU6-989P-201ENST00000362756 107 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CSNK1A1P48729 DYNLT3P1-201ENST00000378574 347 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 RNU6-549P-201ENST00000384433 107 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 FNDC3CP-201ENST00000420795 1155 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 AC013262.1-201ENST00000426710 252 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 AC093392.2-201ENST00000450682 337 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 RPS4XP10-201ENST00000465034 731 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 RN7SL601P-201ENST00000471221 293 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 AC087481.2-201ENST00000565492 330 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 MIR4444-1-201ENST00000581696 74 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 ZNF415P1-201ENST00000582279 1166 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 MIR4444-2-201ENST00000584390 74 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 BDH2P1-201ENST00000602288 736 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 RPAP2P1-201ENST00000603626 1168 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 AC073387.2-201ENST00000604797 784 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 uc_338.25-201ENST00000613756 156 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 AC002076.2-201ENST00000617362 122 ntBASIC2.84□□□□□ -1.95
CSNK1A1P48729 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.84□□□□□ -1.95
CSNK1A1P48729 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.84□□□□□ -1.96
CSNK1A1P48729 AC090740.1-201ENST00000623193 2262 ntBASIC2.84□□□□□ -1.96
CSNK1A1P48729 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.84□□□□□ -1.96
CSNK1A1P48729 SGO1P2-201ENST00000429458 1589 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CSNK1A1P48729 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 OR1S2-201ENST00000302592 978 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 MIR23B-201ENST00000384832 97 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 MTND4LP20-201ENST00000402379 270 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 AL121978.1-201ENST00000402778 359 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 GSTA8P-201ENST00000404253 637 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 AC027644.1-201ENST00000419595 298 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 AC006960.1-201ENST00000419980 153 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 AC006028.1-201ENST00000438379 402 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 MTCYBP34-201ENST00000439552 670 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 AL445669.2-201ENST00000454425 421 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 AC118282.2-201ENST00000508739 374 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CSNK1A1P48729 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 SCARNA20.6-201ENST00000517251 106 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 AP000790.1-201ENST00000528891 737 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 CYB5AP5-201ENST00000549779 389 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 LSM6P2-201ENST00000552208 177 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 AC090666.1-201ENST00000578241 445 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 MIR2682-201ENST00000580305 110 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 XIAPP1-201ENST00000603162 600 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 AC002487.1-201ENST00000604565 994 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 VN1R7P-201ENST00000619242 903 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 AC006111.3-201ENST00000622137 383 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 AC006927.2-201ENST00000639256 389 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CSNK1A1P48729 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSNK1A1P48729 API5P2-201ENST00000397055 1498 ntBASIC2.83□□□□□ -1.96
CSNK1A1P48729 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSNK1A1P48729 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSNK1A1P48729 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CSNK1A1P48729 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSNK1A1P48729 RNU5B-4P-201ENST00000363508 111 ntBASIC2.82□□□□□ -1.96
CSNK1A1P48729 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSNK1A1P48729 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CSNK1A1P48729 MTCO2P31-201ENST00000402702 684 ntBASIC2.82□□□□□ -1.96
CSNK1A1P48729 AL357075.1-201ENST00000404107 726 ntBASIC2.82□□□□□ -1.96
CSNK1A1P48729 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.82□□□□□ -1.96
CSNK1A1P48729 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.82□□□□□ -1.96
CSNK1A1P48729 HSPE1P1-201ENST00000421494 318 ntBASIC2.82□□□□□ -1.96
CSNK1A1P48729 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.82□□□□□ -1.96
CSNK1A1P48729 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms