Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ST13P14-201ENST00000474095 734 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 TRBV12-2-201ENST00000489763 344 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 RN7SL323P-201ENST00000494712 295 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.69□□□□□ -1.82
HNF4AP41235 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.69□□□□□ -1.82
HNF4AP41235 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.69□□□□□ -1.82
HNF4AP41235 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.69□□□□□ -1.82
HNF4AP41235 AC010486.2-201ENST00000505572 483 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 AC026402.1-201ENST00000513642 170 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.69□□□□□ -1.82
HNF4AP41235 RN7SKP209-201ENST00000516888 304 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.69□□□□□ -1.82
HNF4AP41235 AC007834.2-201ENST00000536310 343 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 OSBPL9P5-201ENST00000542581 171 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.69□□□□□ -1.82
HNF4AP41235 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.69□□□□□ -1.82
HNF4AP41235 AC084824.1-201ENST00000550917 1005 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 TRAV15-201ENST00000556680 249 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 MIR3160-1-201ENST00000577972 85 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 COX6CP3-201ENST00000580869 223 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.69□□□□□ -1.82
HNF4AP41235 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.69□□□□□ -1.82
HNF4AP41235 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.69□□□□□ -1.82
HNF4AP41235 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.69□□□□□ -1.82
HNF4AP41235 AC106028.5-201ENST00000610332 395 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.69□□□□□ -1.82
HNF4AP41235 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.69□□□□□ -1.82
HNF4AP41235 AC068831.7-201ENST00000616954 363 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.69□□□□□ -1.82
HNF4AP41235 AC004777.1-201ENST00000624317 287 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 AC091905.1-201ENST00000624400 311 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 U6.101-201ENST00000637707 76 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HNF4AP41235 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
HNF4AP41235 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HNF4AP41235 ZNF807-201ENST00000328088 1707 ntBASIC3.69□□□□□ -1.82
HNF4AP41235 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HNF4AP41235 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
HNF4AP41235 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.69□□□□□ -1.82
HNF4AP41235 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HNF4AP41235 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HNF4AP41235 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.68□□□□□ -1.82
HNF4AP41235 RNU6-213P-201ENST00000384051 104 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 RNU6-413P-201ENST00000384115 107 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 MIR30B-201ENST00000384850 88 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HNF4AP41235 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.68□□□□□ -1.82
HNF4AP41235 AL049610.1-201ENST00000423374 372 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 PSMA6P3-201ENST00000428242 164 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 SNRPEP4-201ENST00000435815 279 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 Z74696.2-201ENST00000436514 498 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 GTF2IP7-202ENST00000436677 309 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HNF4AP41235 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HNF4AP41235 Z83846.1-201ENST00000446798 265 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 AC006480.1-201ENST00000449887 378 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.68□□□□□ -1.82
HNF4AP41235 MTCO3P16-201ENST00000454456 754 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 Z82190.1-201ENST00000454534 490 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.68□□□□□ -1.82
HNF4AP41235 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HNF4AP41235 OR4G11P-201ENST00000492842 939 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 AC093278.1-201ENST00000494700 600 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.68□□□□□ -1.82
HNF4AP41235 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.68□□□□□ -1.82
HNF4AP41235 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.68□□□□□ -1.82
HNF4AP41235 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.68□□□□□ -1.82
HNF4AP41235 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.68□□□□□ -1.82
HNF4AP41235 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.68□□□□□ -1.82
HNF4AP41235 AC008088.1-201ENST00000580993 280 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 AC021749.1-201ENST00000604322 607 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 AC069545.1-201ENST00000605671 358 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 BRDTP1-201ENST00000605735 677 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 AC024941.1-201ENST00000612250 334 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 AC005332.6-201ENST00000613178 446 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 FP236240.3-201ENST00000623061 327 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 AL356585.4-201ENST00000623078 1229 ntBASIC3.68□□□□□ -1.82
HNF4AP41235 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.68□□□□□ -1.82
HNF4AP41235 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HNF4AP41235 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HNF4AP41235 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HNF4AP41235 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
HNF4AP41235 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.68□□□□□ -1.82
HNF4AP41235 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HNF4AP41235 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HNF4AP41235 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.67□□□□□ -1.82
HNF4AP41235 AC005183.1-201ENST00000603687 1979 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HNF4AP41235 AP005901.5-201ENST00000545779 1796 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HNF4AP41235 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.67□□□□□ -1.82
HNF4AP41235 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
HNF4AP41235 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HNF4AP41235 RN7SKP53-201ENST00000411337 315 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.67□□□□□ -1.82
HNF4AP41235 AC245052.5-201ENST00000416320 649 ntBASIC3.67□□□□□ -1.82
HNF4AP41235 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.67□□□□□ -1.82
HNF4AP41235 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HNF4AP41235 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms