Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD12P35452 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD12P35452 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD12P35452 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD12P35452 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD12P35452 GDI2P1-201ENST00000429312 1336 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HOXD12P35452 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD12P35452 FGF7P2-201ENST00000332473 296 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 RNA5SP283-201ENST00000365604 119 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HOXD12P35452 RNU6-730P-201ENST00000383954 104 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HOXD12P35452 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD12P35452 AC007899.1-201ENST00000412776 775 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 AF274854.1-201ENST00000413236 615 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 AC109780.2-201ENST00000413467 845 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 USP9YP14-201ENST00000430663 563 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD12P35452 AC007389.2-201ENST00000434630 306 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 MTND1P28-201ENST00000435623 950 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD12P35452 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD12P35452 AC092641.1-201ENST00000440229 772 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXD12P35452 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD12P35452 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXD12P35452 MTND1P27-201ENST00000451117 902 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 snoU13.22-201ENST00000459428 104 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 RPS15AP17-201ENST00000470598 390 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 AL136126.1-201ENST00000473603 402 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD12P35452 AC093767.1-201ENST00000504523 156 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXD12P35452 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD12P35452 AL117351.2-201ENST00000513571 157 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXD12P35452 RNA5SP49-201ENST00000516450 115 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 AC023632.4-201ENST00000517783 191 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXD12P35452 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD12P35452 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXD12P35452 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXD12P35452 AC008127.2-201ENST00000549925 1075 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
HOXD12P35452 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD12P35452 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD12P35452 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD12P35452 AC053481.3-201ENST00000577881 843 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXD12P35452 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXD12P35452 AC073648.5-201ENST00000603502 305 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD12P35452 AC103710.4-201ENST00000609301 899 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 MIR6867-201ENST00000610636 67 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 AC009318.4-201ENST00000620496 486 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXD12P35452 U6.101-201ENST00000637707 76 ntBASIC4.32□□□□□ -1.72
HOXD12P35452 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD12P35452 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HOXD12P35452 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
HOXD12P35452 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD12P35452 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD12P35452 MARK2P15-201ENST00000432204 2186 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 FAM35DP-201ENST00000323387 2712 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 AP002907.1-201ENST00000606361 1430 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HOXD12P35452 AC018555.1-201ENST00000567548 1980 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HOXD12P35452 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD12P35452 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD12P35452 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD12P35452 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD12P35452 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD12P35452 MIR372-201ENST00000362225 67 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 RNU6-263P-201ENST00000363811 107 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD12P35452 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD12P35452 SNORA51.6-201ENST00000384151 125 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 SNORA75-201ENST00000384158 137 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD12P35452 RNU2-37P-201ENST00000410695 177 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 VDAC1P9-201ENST00000412766 841 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 RPS7P13-201ENST00000413955 498 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 SNRPFP1-201ENST00000414761 252 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD12P35452 AL139095.3-201ENST00000419672 1203 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 RPL7P2-201ENST00000427639 268 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.31□□□□□ -1.72
HOXD12P35452 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD12P35452 SSXP1-201ENST00000453640 473 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 RPL7L1P8-201ENST00000469911 741 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 FAM172BP-201ENST00000487497 1089 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 KCTD9P2-201ENST00000512203 1013 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 AC099522.1-202ENST00000514718 367 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 RNU6-720P-201ENST00000516363 108 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD12P35452 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD12P35452 AC105233.3-201ENST00000531125 744 ntBASIC4.31□□□□□ -1.72
HOXD12P35452 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms