Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 SNORD88.1-201ENST00000408684 91 ntBASIC3.21□□□□□ -1.9
CPS1P31327 LUZP4P1-201ENST00000415420 344 ntBASIC3.21□□□□□ -1.9
CPS1P31327 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.21□□□□□ -1.9
CPS1P31327 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.21□□□□□ -1.9
CPS1P31327 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.21□□□□□ -1.9
CPS1P31327 AK6P1-201ENST00000540219 478 ntBASIC3.21□□□□□ -1.9
CPS1P31327 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.21□□□□□ -1.9
CPS1P31327 AL359821.1-201ENST00000605519 182 ntBASIC3.21□□□□□ -1.9
CPS1P31327 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.21□□□□□ -1.9
CPS1P31327 AL136964.1-201ENST00000622038 2990 ntBASIC3.21□□□□□ -1.9
CPS1P31327 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.21□□□□□ -1.9
CPS1P31327 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.21□□□□□ -1.9
CPS1P31327 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CPS1P31327 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.21□□□□□ -1.9
CPS1P31327 MIR378A-201ENST00000362177 66 ntBASIC3.2□□□□□ -1.9
CPS1P31327 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.2□□□□□ -1.9
CPS1P31327 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.2□□□□□ -1.9
CPS1P31327 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.2□□□□□ -1.9
CPS1P31327 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.2□□□□□ -1.9
CPS1P31327 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.2□□□□□ -1.9
CPS1P31327 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.2□□□□□ -1.9
CPS1P31327 VN1R80P-201ENST00000597126 338 ntBASIC3.2□□□□□ -1.9
CPS1P31327 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.2□□□□□ -1.9
CPS1P31327 AC006254.3-201ENST00000603353 884 ntBASIC3.2□□□□□ -1.9
CPS1P31327 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.2□□□□□ -1.9
CPS1P31327 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CPS1P31327 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CPS1P31327 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CPS1P31327 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.19□□□□□ -1.9
CPS1P31327 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.19□□□□□ -1.9
CPS1P31327 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.19□□□□□ -1.9
CPS1P31327 AC006116.7-201ENST00000590141 756 ntBASIC3.19□□□□□ -1.9
CPS1P31327 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.19□□□□□ -1.9
CPS1P31327 AC091046.2-201ENST00000620775 665 ntBASIC3.19□□□□□ -1.9
CPS1P31327 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CPS1P31327 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.19□□□□□ -1.9
CPS1P31327 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CPS1P31327 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CPS1P31327 AL590084.1-201ENST00000407885 387 ntBASIC3.19□□□□□ -1.9
CPS1P31327 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.19□□□□□ -1.9
CPS1P31327 AL357520.1-201ENST00000441557 453 ntBASIC3.19□□□□□ -1.9
CPS1P31327 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.19□□□□□ -1.9
CPS1P31327 XKRY-201ENST00000510392 1100 ntBASIC3.19□□□□□ -1.9
CPS1P31327 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.19□□□□□ -1.9
CPS1P31327 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.19□□□□□ -1.9
CPS1P31327 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.19□□□□□ -1.9
CPS1P31327 AC016542.2-201ENST00000624201 619 ntBASIC3.19□□□□□ -1.9
CPS1P31327 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
CPS1P31327 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CPS1P31327 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CPS1P31327 AP005901.5-201ENST00000545779 1796 ntBASIC3.18□□□□□ -1.9
CPS1P31327 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.18□□□□□ -1.9
CPS1P31327 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.18□□□□□ -1.9
CPS1P31327 AC234781.4-201ENST00000419384 244 ntBASIC3.18□□□□□ -1.9
CPS1P31327 MTCO1P42-201ENST00000457379 726 ntBASIC3.18□□□□□ -1.9
CPS1P31327 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CPS1P31327 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.18□□□□□ -1.9
CPS1P31327 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CPS1P31327 VN1R79P-201ENST00000593540 513 ntBASIC3.18□□□□□ -1.9
CPS1P31327 CR589904.2-201ENST00000612533 440 ntBASIC3.18□□□□□ -1.9
CPS1P31327 AL109809.4-201ENST00000603520 2185 ntBASIC3.18□□□□□ -1.9
CPS1P31327 PNPT1P2-201ENST00000456768 2050 ntBASIC3.17□□□□□ -1.9
CPS1P31327 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.17□□□□□ -1.9
CPS1P31327 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CPS1P31327 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CPS1P31327 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.17□□□□□ -1.9
CPS1P31327 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.17□□□□□ -1.9
CPS1P31327 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CPS1P31327 PTP4A1P7-201ENST00000423476 514 ntBASIC3.17□□□□□ -1.9
CPS1P31327 MTATP6P11-201ENST00000428071 670 ntBASIC3.17□□□□□ -1.9
CPS1P31327 AL390023.1-201ENST00000428836 262 ntBASIC3.17□□□□□ -1.9
CPS1P31327 OR4K11P-201ENST00000431829 904 ntBASIC3.17□□□□□ -1.9
CPS1P31327 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.17□□□□□ -1.9
CPS1P31327 GAPDHP27-201ENST00000447427 1020 ntBASIC3.17□□□□□ -1.9
CPS1P31327 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.17□□□□□ -1.9
CPS1P31327 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.17□□□□□ -1.9
CPS1P31327 AC103710.1-201ENST00000610003 901 ntBASIC3.17□□□□□ -1.9
CPS1P31327 EXOC5P1-201ENST00000510543 1969 ntBASIC3.17□□□□□ -1.9
CPS1P31327 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CPS1P31327 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CPS1P31327 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CPS1P31327 AC066616.2-201ENST00000559334 1481 ntBASIC3.17□□□□□ -1.9
CPS1P31327 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.16□□□□□ -1.9
CPS1P31327 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CPS1P31327 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CPS1P31327 AL035551.1-201ENST00000446931 348 ntBASIC3.16□□□□□ -1.9
CPS1P31327 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.16□□□□□ -1.9
CPS1P31327 RPL38P4-201ENST00000502376 214 ntBASIC3.16□□□□□ -1.9
CPS1P31327 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.16□□□□□ -1.9
CPS1P31327 ISCA1P3-201ENST00000577104 373 ntBASIC3.16□□□□□ -1.9
CPS1P31327 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.16□□□□□ -1.9
CPS1P31327 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.16□□□□□ -1.9
CPS1P31327 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.16□□□□□ -1.9
CPS1P31327 AL359198.2-201ENST00000611836 194 ntBASIC3.16□□□□□ -1.9
CPS1P31327 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CPS1P31327 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CPS1P31327 AC097714.1-201ENST00000511272 1647 ntBASIC3.16□□□□□ -1.9
CPS1P31327 MIR142-201ENST00000384835 87 ntBASIC3.15□□□□□ -1.9
CPS1P31327 SNORA11.4-201ENST00000408823 129 ntBASIC3.15□□□□□ -1.9
CPS1P31327 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms