Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA11P31270 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
HOXA11P31270 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA11P31270 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA11P31270 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA11P31270 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA11P31270 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA11P31270 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
HOXA11P31270 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA11P31270 Y_RNA.18-201ENST00000362461 102 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA11P31270 RNU6-253P-201ENST00000384730 105 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 MIR513A2-201ENST00000385249 127 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HOXA11P31270 RNU6-1300P-201ENST00000391046 108 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXA11P31270 FCF1P9-201ENST00000412546 282 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA11P31270 EIF4EP1-201ENST00000422311 642 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA11P31270 AC091286.1-201ENST00000431233 461 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA11P31270 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXA11P31270 USP9YP29-201ENST00000445112 563 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXA11P31270 RPL23AP15-201ENST00000450202 459 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 RPS27P23-201ENST00000487608 251 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 AC108941.1-201ENST00000502853 530 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 MTND2P33-201ENST00000506452 1031 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 RAC1P2-201ENST00000511164 579 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.14□□□□□ -1.75
HOXA11P31270 RNA5SP164-201ENST00000516533 110 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 RNU6-405P-201ENST00000516637 110 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXA11P31270 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA11P31270 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXA11P31270 AC087481.2-201ENST00000565492 330 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXA11P31270 AC006270.2-201ENST00000578523 652 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 AC020914.6-201ENST00000594327 272 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA11P31270 U73023.1-201ENST00000603134 700 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 MTCYBP22-201ENST00000603788 447 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.14□□□□□ -1.75
HOXA11P31270 AL391497.1-201ENST00000608671 547 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 AC012360.2-201ENST00000609349 391 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 AL591424.2-201ENST00000617023 128 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 AC099842.1-201ENST00000619919 596 ntBASIC4.14□□□□□ -1.75
HOXA11P31270 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HOXA11P31270 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA11P31270 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA11P31270 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HOXA11P31270 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA11P31270 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
HOXA11P31270 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA11P31270 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA11P31270 AC015813.6-201ENST00000624409 5808 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
HOXA11P31270 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA11P31270 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
HOXA11P31270 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA11P31270 Y_RNA.516-201ENST00000384541 124 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 TMSB4XP8-201ENST00000402089 135 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 Y_RNA.604-201ENST00000410574 102 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 AC069218.2-201ENST00000411665 344 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 RPS7P13-201ENST00000413955 498 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 TMSB4XP6-201ENST00000415187 135 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA11P31270 TMSB4XP1-201ENST00000424567 135 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA11P31270 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA11P31270 AL138799.3-201ENST00000438968 350 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXA11P31270 AL590399.6-201ENST00000446396 307 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 HMGN2P21-201ENST00000447764 270 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA11P31270 RPL7P15-201ENST00000461190 712 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 AC015724.1-201ENST00000478577 156 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 AC104685.1-201ENST00000502445 371 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA11P31270 AC048346.1-201ENST00000510247 144 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 DUXAP2-201ENST00000519198 589 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA11P31270 OR5AK1P-201ENST00000524837 922 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HOXA11P31270 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA11P31270 AC090877.1-201ENST00000561418 344 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA11P31270 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXA11P31270 AC022146.1-201ENST00000595307 847 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 AC091488.1-201ENST00000604239 660 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 AL355073.2-201ENST00000612106 557 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 Z99129.1-201ENST00000612510 255 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 AC116165.2-201ENST00000616705 206 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 U73479.1-201ENST00000618062 168 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 AL034408.1-202ENST00000636088 415 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 AC090337.1-201ENST00000579651 2074 ntBASIC4.13□□□□□ -1.75
HOXA11P31270 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA11P31270 AC106871.1-201ENST00000568324 3102 ntBASIC4.12□□□□□ -1.75
HOXA11P31270 UBE3AP2-201ENST00000429033 2259 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms