Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC020593.1-201ENST00000507399 299 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.89□□□□□ -1.79
ABCD3P28288 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ABCD3P28288 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.89□□□□□ -1.79
ABCD3P28288 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.89□□□□□ -1.79
ABCD3P28288 AC026801.2-201ENST00000515352 425 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 Y_RNA.688-201ENST00000516565 95 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 RNA5SP468-201ENST00000516782 93 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.89□□□□□ -1.79
ABCD3P28288 AP003730.1-201ENST00000524605 285 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 AC087373.1-201ENST00000524920 491 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ABCD3P28288 SNRPGP16-201ENST00000533275 226 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 CYCSP29-201ENST00000533731 318 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.89□□□□□ -1.79
ABCD3P28288 AC091489.2-201ENST00000566263 604 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.89□□□□□ -1.79
ABCD3P28288 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.89□□□□□ -1.79
ABCD3P28288 TPMTP1-201ENST00000592307 737 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 AF131215.7-201ENST00000602443 707 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 AC012443.1-201ENST00000605605 231 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 AC091965.4-201ENST00000607691 587 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.89□□□□□ -1.79
ABCD3P28288 AC012360.2-201ENST00000609349 391 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.89□□□□□ -1.79
ABCD3P28288 MIR8059-201ENST00000620427 81 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 MIR4727-201ENST00000622232 55 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 MIR4275-201ENST00000636486 87 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.89□□□□□ -1.79
ABCD3P28288 AC244258.1-201ENST00000637553 1071 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
ABCD3P28288 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ABCD3P28288 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ABCD3P28288 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
ABCD3P28288 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ABCD3P28288 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
ABCD3P28288 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.89□□□□□ -1.79
ABCD3P28288 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ABCD3P28288 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.89□□□□□ -1.79
ABCD3P28288 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.89□□□□□ -1.79
ABCD3P28288 LARP1BP1-201ENST00000506036 1359 ntBASIC3.89□□□□□ -1.79
ABCD3P28288 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
ABCD3P28288 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.88□□□□□ -1.79
ABCD3P28288 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.88□□□□□ -1.79
ABCD3P28288 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
ABCD3P28288 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
ABCD3P28288 AC024560.2-201ENST00000507981 1497 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AC095050.2-201ENST00000510748 1458 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AC106871.1-201ENST00000568324 3102 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ABCD3P28288 RNU6-50P-201ENST00000362356 103 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AC068538.1-201ENST00000376856 336 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ABCD3P28288 Y_RNA.548-201ENST00000384656 105 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 RNU6-114P-201ENST00000384704 105 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AL136372.1-201ENST00000403060 228 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.88□□□□□ -1.79
ABCD3P28288 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.88□□□□□ -1.79
ABCD3P28288 HSFY4P-201ENST00000415994 1181 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AC009518.2-201ENST00000418056 731 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.88□□□□□ -1.79
ABCD3P28288 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.88□□□□□ -1.79
ABCD3P28288 AC079780.1-201ENST00000428259 207 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AC096638.2-201ENST00000434965 711 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.88□□□□□ -1.79
ABCD3P28288 AC239367.2-201ENST00000447309 705 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AL359073.1-201ENST00000448036 403 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.88□□□□□ -1.79
ABCD3P28288 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.88□□□□□ -1.79
ABCD3P28288 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.88□□□□□ -1.79
ABCD3P28288 RPS4XP13-201ENST00000483219 789 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.88□□□□□ -1.79
ABCD3P28288 AC099522.1-202ENST00000514718 367 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 MTCO2P32-201ENST00000514865 403 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.88□□□□□ -1.79
ABCD3P28288 AC105233.3-201ENST00000531125 744 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.88□□□□□ -1.79
ABCD3P28288 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.88□□□□□ -1.79
ABCD3P28288 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.88□□□□□ -1.79
ABCD3P28288 AP001429.1-201ENST00000602568 530 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AC025946.2-201ENST00000603398 234 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 AC090425.2-201ENST00000608818 501 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.88□□□□□ -1.79
ABCD3P28288 CCT4P2-201ENST00000233836 1548 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.88□□□□□ -1.79
ABCD3P28288 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.88□□□□□ -1.79
ABCD3P28288 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ABCD3P28288 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ABCD3P28288 GABPAP-201ENST00000419271 1356 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
ABCD3P28288 AC010733.2-201ENST00000589496 5702 ntBASIC3.88□□□□□ -1.79
ABCD3P28288 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ABCD3P28288 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.87□□□□□ -1.79
ABCD3P28288 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.87□□□□□ -1.79
ABCD3P28288 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ABCD3P28288 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.87□□□□□ -1.79
ABCD3P28288 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ABCD3P28288 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.87□□□□□ -1.79
ABCD3P28288 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms