Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 HSPE1P26-201ENST00000405341 275 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AL138885.1-201ENST00000405921 675 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 RN7SKP220-201ENST00000410611 288 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 RPL31P2-201ENST00000413849 377 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AL592310.1-201ENST00000414330 671 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 MTCYBP24-201ENST00000420387 1106 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 TRIAP1P1-201ENST00000427062 225 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.1□□□□□ -1.91
HOXC4P09017 AC093422.3-201ENST00000428506 305 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 RPL23AP69-201ENST00000431134 458 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC4P09017 RPL21P112-201ENST00000434403 463 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 HMGB1P45-201ENST00000435986 653 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 UBE2V1P5-201ENST00000440070 405 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 MTCO1P53-201ENST00000441633 699 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 RPS26P56-201ENST00000444468 240 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXC4P09017 RN7SL442P-201ENST00000473804 320 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AC011825.1-201ENST00000484967 388 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC4P09017 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
HOXC4P09017 AC112673.1-201ENST00000513168 575 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 RN7SKP287-201ENST00000516546 266 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC4P09017 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC4P09017 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC4P09017 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC4P09017 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC4P09017 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXC4P09017 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC4P09017 MTCYBP28-201ENST00000566728 1132 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC4P09017 UBL5P2-201ENST00000583788 219 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 YWHAQP7-201ENST00000603536 658 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 RPP40P2-201ENST00000603596 712 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AL365400.2-201ENST00000605604 902 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AP002802.2-201ENST00000605877 235 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 HMGN2P28-201ENST00000606102 262 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AC006386.1-201ENST00000619436 415 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AC099506.2-201ENST00000623074 221 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AC048347.1-201ENST00000624621 427 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 CU459211.1-201ENST00000635667 749 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 AL353743.1-202ENST00000431724 1695 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 MTND4P8-201ENST00000514997 1362 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXC4P09017 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXC4P09017 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC4P09017 AL672296.1-201ENST00000427780 2158 ntBASIC3.1□□□□□ -1.91
HOXC4P09017 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXC4P09017 RNU1-75P-201ENST00000347264 129 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 SNORD56.4-201ENST00000363883 71 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 RNU6-1243P-201ENST00000364028 107 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 SKINT1L-201ENST00000401057 817 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC4P09017 MTND2P16-201ENST00000419987 799 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 AC244098.2-201ENST00000422068 99 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 NANOGP5-201ENST00000424456 877 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 AC005517.2-201ENST00000424673 553 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 AC092634.2-201ENST00000428146 1010 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 OR2B8P-201ENST00000432841 938 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HOXC4P09017 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC4P09017 ISCA1P2-201ENST00000438679 421 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 ARF4P4-201ENST00000439608 520 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 AC000041.1-201ENST00000439655 175 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 OR10R1P-201ENST00000441524 1141 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 AC004865.1-201ENST00000442276 1003 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC4P09017 MTCO3P35-201ENST00000485582 781 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 NCOR1P1-202ENST00000486162 291 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.09□□□□□ -1.91
HOXC4P09017 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC4P09017 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC4P09017 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC4P09017 AC104108.1-201ENST00000509930 412 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC4P09017 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC4P09017 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC4P09017 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC4P09017 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC4P09017 CYB5AP5-201ENST00000549779 389 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC4P09017 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC4P09017 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.09□□□□□ -1.91
HOXC4P09017 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC4P09017 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC4P09017 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC4P09017 AC093424.1-201ENST00000604999 338 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 AC016877.3-201ENST00000606778 504 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 AC106052.1-201ENST00000608029 497 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 AC135507.2-201ENST00000612443 309 ntBASIC3.09□□□□□ -1.91
HOXC4P09017 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC4P09017 ELL2P4-201ENST00000446870 1376 ntBASIC3.09□□□□□ -1.92
HOXC4P09017 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HOXC4P09017 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HOXC4P09017 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC4P09017 AC007256.1-201ENST00000392253 2765 ntBASIC3.08□□□□□ -1.92
HOXC4P09017 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC4P09017 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms